Lates calcarifer (barramundi perch): 108901576
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Entry
108901576 CDS
T04895
Name
(RefSeq) glycine receptor subunit alpha-2 isoform X1
KO
K05194
glycine receptor alpha-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108901576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108901576
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glycine
108901576
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TonB_C
HemY_N
Motif
Other DBs
NCBI-GeneID:
108901576
NCBI-ProteinID:
XP_018558619
UniProt:
A0AAJ7QKP9
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Position
LG1:complement(16489668..16501248)
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AA seq
503 aa
AA seq
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MGKPPGMNRSFIKVLVALFTYFMETSNFRVVDAKEHDPRSSSNMSPSDFLDSLMGRTSGY
DARIRPNFKGPPVNVTCNIFINSFGSVTETTMVSSSGILVDCTMYNVSMCYLSPQPAGPP
VNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLAYSKYPDSSLDLDPSMLDSIWKP
DLFFANEKGANFHDVTTDNKLLRIFKDGNVLYSIRLTLILSCPMDLKNFPMDVQTCTMQL
ESFGYTMNDLIFEWLENGAVQVSEGLTLPQFIMREEKELGYCTKHYNTGKFTCIEVKFHL
ERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPK
VSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSRQQKEFLRLRRRQRRNHKDEDMREGRFN
FAGYNMSQCLPTKDGSAVKNAAPAPNPQPPVPKDIDTMRKKFVDRAKRIDTISRAAFPLA
FLIFNVFYWVTYKIIRHEDIHKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccaccaggaatgaatcgctccttcattaaggttttggtagctttatttaca
tatttcatggagacaagcaactttagagttgtggatgccaaggagcacgatcccagatca
tcctccaacatgtctccatccgactttctggactcactcatgggtcgcacgtccgggtat
gatgcacgaataagaccgaattttaaaggtccccctgtaaacgttacatgcaatattttt
atcaacagtttcggctctgtcacagagacaactatggtgagttcctctggcattttggtt
gattgtacaatgtacaatgtgtcaatgtgttatctatcccctcaacctgcaggtccacca
gttaatgttacctgcaacatatttatcaacagctttggttctatagcagaaactacaatg
gattacagagtgaacatcttcctgcggcagacatggaatgaccctcggctggcgtatagt
aagtacccagattcctccctcgacctggacccatccatgttggactccatatggaagccg
gacctcttctttgccaatgagaaaggagccaacttccatgatgtcaccacagacaacaag
ctgctgaggatcttcaaggacgggaatgtcctctacagcatcaggttgactcttattctg
tcctgcccgatggatctgaagaactttccgatggatgtccaaacctgtacaatgcaactg
gaaagttttggctacaccatgaatgacttgatctttgagtggctggagaacggtgcagtg
caggtttcagaggggctcaccctgcctcagttcattatgagggaagagaaggagctgggc
tactgtaccaaacactacaacaccggtaaattcacatgtattgaagttaaattccatctg
gagcgccagatgggctactacctgatccagatgtacattccttccctcttgattgtcatc
ctctcatgggtgtctttttggattaatatggatgctgctcctgccagagtggcattgggc
atcaccactgtgctcaccatgaccacccaaagctctggctccagagcttctcttccaaag
gtctcttacgtgaaagccattgatatctggatggctgtgtgtctgctctttgtatttgct
gcattgctagaatatgctggggttaattttgtctccaggcaacagaaagagttccttcgc
ctgaggcgaagacaaaggaggaatcacaaggatgaggatatgcgtgaaggccgctttaat
tttgctggctacaacatgagtcagtgtctgccaacgaaggatggctcagctgttaagaac
gctgctccagctccgaaccctcaaccgccagtcccaaaagacatagacaccatgaggaag
aagtttgtggacagagccaagaggatagacacaatctccagggctgcctttcctctggcc
ttcctcatcttcaacgtcttctactgggttacctacaagatcatcagacatgaggacatc
cacaaaaagtaa
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