Lates calcarifer (barramundi perch): 108901595
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Entry
108901595 CDS
T04895
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901595
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108901595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
CAF-1_p60_C
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
B-prop_COPA_B_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF12
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
108901595
NCBI-ProteinID:
XP_018558648
UniProt:
A0AAJ7QKP1
LinkDB
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Position
LG1:complement(16074403..16082261)
Genome browser
AA seq
618 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSLDFQHSSDGRINRLATAGVDTTVRLWRVDTGPDGKAVVDFLS
NLARHTKAVNVVRFSPNGELLASGGDDALILLWKLNDSKEPEQAPVFQEDEDAQLNKESW
SVVKTLRGHIEDVYDICWTRDGNLMVSGSVDNTAIMWDISKGQKLCILNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTHTKKKAFCISKMSSGPLAEGEVKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEIGENIINTTYIFSRKSLKRPIAHLPCPTKATLAVRCCPVYFE
LRTKKGEDGCVQALPNVFQLPYRMVFAVASEDSIFLYDTQQTLPFGLVSNIHYHTLSDCT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPTLEVFVPNSGVEKKGKKSSVGKTSS
PVSQPSSSAPTPTSQTSHGKDAPSVTPPEEKKSTPSAKPKTQPRRITLNTLEGWGKPTTP
KTTAPPAPQTPTPGSTSAPSTPQPHITPLTPTSSSKTQIRITPLTPSTPKVLNSANTPGP
TTPKGTTTPKGPTPRRVSLTPVASRSPAVSSLFSTPSSTEKAKHERPSPPTDPVCQPPES
KRPKTSDPPAKTSVTQVL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtaacgtgtgagattgcatggcacaacaaggagccagtatacagcctggac
ttccagcacagctctgatggacgcattaatcgattggccacagctggagtagacaccaca
gtcagactgtggcgggtggacacaggcccagatgggaaggcagtggtggattttctgtct
aatctggcaagacacaccaaggctgtcaatgtagtgcgcttcagccctaatggagagctg
cttgcctcaggaggagatgatgcattaattctgctgtggaaactcaatgactctaaggag
cctgagcaggcacctgtgtttcaggaggatgaagatgctcagctcaacaaggagagctgg
tctgtggtcaagacactaaggggacacatagaggatgtgtatgacatctgctggacacga
gatggaaacttgatggtgtctggctctgttgacaacactgctattatgtgggacatcagc
aaaggacagaagctgtgtatcttgaatgaccataagagctatgtgcagggtgtgacctgg
gatcctctggggcaatatgttgccactctcagctgtgacagagtaatgcgtgtgtacagc
actcacaccaagaagaaggctttctgtatcagtaaaatgagctctgggccacttgcagag
ggagaggtcaagcagtacagaatgttccatgatgacagtatgaggtcgttctttcgacgc
ctttcattcacccctgatgggtctttcctgctcgccccagctggatgtgtggagattgga
gagaacatcataaacaccacctacatcttttccagaaagagccttaagaggcctatcgcc
catttgccatgcccaactaaagctacactggctgtgcgctgctgccctgtctactttgaa
ctgagaaccaagaagggagaagatggttgtgtccaggctcttcctaacgtattccagttg
ccgtaccgtatggtgtttgcagtggcatcagaggactccatcttcttgtacgacactcaa
cagactcttcctttcggcctggtgtccaacatccactatcacacactcagtgactgcaca
tggtctcgcgatggttccttcttggcggtgtcctccacagatggctactgctcattcctg
tccttctcccctggggagctgggtactccactgaaggagccccccacattggaggtcttt
gtcccaaacagtggtgttgagaaaaagggaaagaagtcatcagtgggcaagacgtcgtct
cctgtgtctcagccatcaagctcagccccaactcccacgtcccaaaccagccatggcaaa
gatgccccgtctgtcactcctccggaggagaagaagagcacccccagtgccaagcctaaa
actcagccccgcaggatcaccctcaacaccctggagggttgggggaagcccactacccct
aaaactacagctcctccagcgcctcagaccccaacacctggaagcacaagcgctccgtca
actccccaaccacacatcacccccctcacccccaccagctcctccaaaacccagatacgc
atcacccccctcactccttccaccccaaaagtcctcaacagtgctaatactcctgggccc
accactcctaagggtacaaccaccccaaaggggcccaccccaaggagagtatctttgact
cccgttgcatccagatccccagctgttagttcactcttcagcactccctcctccactgag
aaggccaaacatgaacgtccttctcctcccactgatccagtgtgccagcctccagagtcc
aaacggcccaaaaccagcgacccccctgcaaagaccagtgtcacccaggtgttgtag
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