Lates calcarifer (barramundi perch): 108901599
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Entry
108901599 CDS
T04895
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108901599
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108901599
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108901599
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Others
108901599
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GFIT
Motif
Pfam:
Glypican
Serglycin
DUF5856
Fz
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
108901599
NCBI-ProteinID:
XP_018558653
UniProt:
A0A4W6CNQ6
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Position
LG1:16857441..16923021
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AA seq
553 aa
AA seq
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MLRLETIICTFSVLSFAARADFKARNCSDVREACIGKGFSFAHVPLQEIPGDHLRVCPQG
NTCCTQEMEDRFGQQSKQDFENLLDEMSHVLRSTFVSRHKRFDEFFLELLENTERSLNEM
FVRTYGKPYMQNSEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVAQRVSKVSSTPA
CMRALTKMLYCPFCQGMPAVKPCKNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSAQVSYRVFQGCGQPKPAGMTRSTRGVSDVFNAR
FRPYSPEERPTTAAGTSLDRLVVDIKEKLKLSKKFWSNLPEVMCVEDRVTAGNTSDEECW
NGHTKGRYFPEVQKDGLTNQVNNPEVSVDITRPDTFIRQQIMALRVMTNKLKNAYNGNDI
YFQDSSDEGSGSGSGSGCTEVCPTDMDGAATEAPVVRADRSGPVGGSALLHAPSVALPTM
LALSALALHRQWR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctcagactggagaccatcatttgcactttttctgtgctgtcatttgcagcaagagca
gattttaaagcacggaactgcagcgacgtgagggaggcttgtatcgggaaaggcttcagc
ttcgcacatgttcctcttcaggagatcccaggtgaccatcttcgtgtatgtcctcaggga
aacacatgctgcacccaggaaatggaggacagatttggccaacagagcaaacaggacttc
gagaatctgcttgatgaaatgagtcatgttttgagaagcacctttgtttccagacataag
agatttgatgagttcttcctggagctgctggagaacacagagaggtccctgaatgagatg
tttgtgaggacttacggcaagccttacatgcagaactcggaggtctttgagaacctgttt
gctgagctgaagcgctattacacaggggggaatgttaacctggaggaaatgcttaatgac
ttttggtcgcggctactggagcgtatgttcacactgctcaactcccagtatgttatcact
gaggactatctggagtgtatcagcaagtacaccgaccagctcaagccctttggagacgtg
cccaggaagctcaaggctcaggttacccgggcattcatcgctgcacgcacatttgtccaa
gggctctctgttggccgggaggtggcccagagagtgtctaaggtaagcagcactccagca
tgtatgcgagcgctgacaaagatgctgtactgccctttttgtcagggcatgccagcagtg
aaaccctgtaagaactactgcctgaatgtcatgaagggctgcctggctaatcaagctgac
ctggatccagagtggaaccagtatattgatgccatgctgctggtggcgcagaggttggag
ggacctttcaacattgaatctgtcatggagcctattgatgtcaagatttcagaggccatc
atgaatatgcaagataacagtgcccaggtctcctacagggtttttcaaggctgtgggcag
ccaaaacccgcaggaatgactaggtctactcgtggtgtttcggatgtgttcaacgcccgc
ttcaggccatacagcccagaggagcggcctaccactgcggctggcacaagcctagacaga
ctggtggttgacataaaagagaaactgaaactgtccaagaaattctggtccaacctgcct
gaggtgatgtgcgtggaggacagagtgactgctggaaataccagtgatgaggagtgctgg
aatggacacaccaagggcaggtacttccctgaggtccaaaaggatggactgacaaaccag
gtgaataaccctgaggtgagcgtggacatcacccgcccagacaccttcatccgccagcag
atcatggctctgagggtgatgactaacaagctgaaaaatgcctacaatggcaatgatatc
tactttcaagattcaagcgatgaaggcagtggctcaggtagtggcagcggctgcacagag
gtctgccccacagacatggacggtgctgccaccgaagccccggtggtgagagccgaccga
agcgggcctgtgggtggctctgccctgctccatgcaccctctgtagccctgccaaccatg
ctggccctctcagccctggcactccaccgacaatggagataa
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