Lates calcarifer (barramundi perch): 108901642
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Entry
108901642 CDS
T04895
Symbol
sgpp1b
Name
(RefSeq) sphingosine-1-phosphate phosphatase 1
KO
K04716
sphingosine-1-phosphate phosphatase 1 [EC:3.1.3.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108901642 (sgpp1b)
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Gene cluster
GFIT
Motif
Pfam:
PAP2
PAP2_3
Motif
Other DBs
NCBI-GeneID:
108901642
NCBI-ProteinID:
XP_050934070
UniProt:
A0AAJ8BJ88
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Position
LG19:complement(23285028..23309277)
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AA seq
510 aa
AA seq
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MGKRDWFVEPFRYLQDPHLVARFQQMCGVRGTFSRTACPGSIATSSGSSKEEDRSHSHNN
GACHHHITGENERENLAVIGAGEGEKRVAGSAVANNHGEDSENAPRNGAVMSAATAGGET
VGVGSNGRSLAGATAAGQGGSSSSAAGPDFSGAKELNGSENSGEDPGSARSSTVKPLRRN
SLTGDAGQEFLIENRFLYYLFTFGTELGNELFYITFFPFVIWNLDAFVGRRLIMVWVWVM
YLGQCTKDVFGWPRPASPPVVKVEMFYNSEYSMPSTHAMSGTAIPFSLFFMTYGRWEYPF
TLGFSLALCWCLLVCVSRIYMGMHSVLDVMAGVLYSVLILLFFLPALDLIDGFNLTCRYA
PLIIISLHLGLGLFSFTLDTWSTSRGDTAQILGTGAGVALASHVNHYLGLLPDPTPDQLP
FTLPALSVGLVAVAVLRLVLGVLVLMATRALMKAVTIPLVCWVSRVPSGDVRKARQHMEV
ELPYRYIVYGTVGFNVLFLVPLLFSYMQLS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgtgactggttcgtggagccgttccgctatctccaagacccccaccttgtc
gcccgctttcagcagatgtgtggggtgcgcgggacgttttcgagaaccgcctgccctggt
agcatcgccaccagcagcggcagcagcaaggaagaggaccggagccactcgcacaacaac
ggggcttgtcatcatcacatcaccggggaaaatgagagagaaaacctggccgtcattgga
gctggagagggggagaaaagggttgccgggtcagctgttgcgaataaccacggggaggac
agtgaaaacgctccccggaacggggcggtgatgtccgcagcgaccgccgggggagaaacg
gtcggtgtgggcagcaacggccgctcgctcgccggggctacagccgcgggtcagggcggc
agcagcagcagcgcagccgggccggacttttcaggggctaaagagttaaatgggagcgag
aacagcggtgaagacccgggttccgcacggagcagcacggtgaaacccctccgcagaaac
tctctaacgggcgacgccgggcaggagttcctgatcgagaaccggttcttgtactacctc
ttcactttcggaaccgagctgggcaacgagctcttctacatcaccttcttccccttcgtc
atctggaacttggacgccttcgtgggcaggaggctgatcatggtctgggtctgggtcatg
tatctgggacagtgcaccaaggatgtgttcggttggccccggcccgcctcaccgcctgtg
gtcaaagtggagatgttttacaactcggagtacagcatgccgtccacacacgccatgtcg
ggcacagccatccccttctccctgttcttcatgacctacggccggtgggagtacccgttc
acactgggcttcagtctggctctctgctggtgtctgctggtctgtgtcagtcggatctac
atgggaatgcactcagtcttggacgtcatggccggcgtcctctacagcgtcctgatcctc
ctcttcttcctcccggccctggacctgatcgatggcttcaacctgacctgccgctacgcc
ccgctcatcatcatctccctccacctgggcctgggcctgttttccttcaccctggacacc
tggagcacctcgcggggcgataccgctcagatcctgggcacgggggccggcgtggccctg
gcctcccacgtcaaccactacctgggcctgctgcctgacccgacaccggaccagctgccg
ttcaccctgcccgccctcagcgtgggtctggtggccgtggccgtgctgcggctcgtcctg
ggcgtcctggtgctgatggccacgcgggcgctgatgaaggccgtcaccatcccgctggtg
tgctgggtgtccagggtgcccagcggggacgtgaggaaggccaggcagcacatggaggtg
gagctgccttaccggtacatcgtctacgggacggtgggcttcaacgtgctcttcctggtc
ccgctgctcttcagctacatgcagctctcctga
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