Lates calcarifer (barramundi perch): 108901652
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Entry
108901652 CDS
T04895
Name
(RefSeq) fibrinogen gamma chain isoform X1
KO
K03905
fibrinogen gamma chain
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
lcf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108901652
04518 Integrin signaling
108901652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901652
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108901652
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108901652
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108901652
Hyaluronan
Extracellular matrix or blood plasma proteins
108901652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
SPATA24
Motif
Other DBs
NCBI-GeneID:
108901652
NCBI-ProteinID:
XP_018558724
UniProt:
A0AAJ7VKK4
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Position
LG5:8844014..8855963
Genome browser
AA seq
432 aa
AA seq
DB search
MAPSLLATAGGLLLLFSFSSAQTRGDNIALCTPNDGFGKYCPTTCGVADYLTRYMPEVTR
DLDSMLRDLEIAANLTQGTEEKIVYMKDSATSAQKSSPQDSYFSKTSNMLEDVLRFEKTI
IQQEQQIFELQNLISSNERRLADLKQLSIQLQQKCSEPCKDTVDIQPQTGTDCQDIANKG
ATTSGLYYVKPAKATEQFLVYCEIDNFGRGFTVIQRRRDGSVDFNKNWIQYKEGFGYLSP
DDTTEFWLGNEKIHQLTAGSTIPTVLRVELVDWEGNKRYADYNMFRLGPEVDMYRLTYGY
YFGGDAGDAFDGFDFGDDPSDKFYTSHNGMQFSTPDKDNDKYDGNCAQQDGSGWWMNRCH
AAHLNGKYYQGGRYTEKDAGEYGYDNGIIWVTWHNRWYSLKETTMKLIPLSRITAGGGQQ
TSVKEYGGLGDS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcacttcttgcaacagcaggaggacttctgttacttttctccttctcatca
gcacaaaccagaggcgacaacatcgcattatgcaccccaaatgatggctttggaaagtac
tgtcccactacatgtggagtggctgattacttaacgaggtacatgccagaagtgaccagg
gatttggacagcatgttaagagacctggagatagctgccaatttgacccaggggactgaa
gaaaaaattgtctatatgaaagattctgctacttcagcccaaaagagttccccacaagac
tcatacttcagtaagacatcaaatatgctggaagatgtccttcggtttgaaaagaccatc
attcaacaggaacaacaaatatttgaacttcagaatctaatttcatccaacgagaggaga
ctggcagacttgaaacaactctccattcagctgcagcagaaatgcagtgagccttgcaaa
gacacagttgacatccaaccccaaacaggaacagactgccaagatattgcaaacaaaggt
gctaccaccagtggtctttactacgtcaagccagcgaaagccactgagcagttcctggtc
tattgtgagattgacaactttggacgcggcttcacagtaatacagaggagacgtgatggc
agtgtggacttcaacaagaactggatccagtacaaggagggctttggttatctctcccca
gatgacactactgagttctggctcggcaacgagaagatccatcagctgactgctggttcg
accatcccaactgtgctgagggtagagctcgttgactgggagggcaacaaaaggtatgca
gattacaacatgttcagactgggaccagaggtcgacatgtaccgtctgacctatggttac
tactttggcggtgatgcaggagatgcttttgatggctttgattttggagatgaccccagt
gacaagttctacacatcacacaatggcatgcagttcagtacccctgacaaggacaatgac
aagtatgacggcaactgtgctcagcaggacggctctggctggtggatgaacagatgtcat
gctgcacatttgaatggcaaatactaccagggtggcaggtacacagaaaaggatgcaggt
gaatacggctacgacaacggcatcatttgggtcacatggcacaaccgctggtactccctg
aaagagaccactatgaagctcattccgctcagccgcatcacagcaggcggtggacagcag
acgagtgtgaaagagtatggcggacttggagattcgtaa
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