Lates calcarifer (barramundi perch): 108901656
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Entry
108901656 CDS
T04895
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108901656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108901656
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108901656
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108901656
NCBI-ProteinID:
XP_018558729
UniProt:
A0A4W6EUJ4
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Position
LG5:8809180..8819922
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AA seq
315 aa
AA seq
DB search
MPLNVVLDGPAPWGFRLMGGKDFNQPLTISRITPGSKASIANLCPGDIILAIEGVPATDM
LHCEAQNKIKESTSQLCLTVERNESRLWSPRVVEEGRAHPYKLNLEAEQQEYKPIGTTHN
RRAQPFVAAANIDDKRQVVSTSYNTPIGLYSSGNIQDAMEGQIRGLVHQKPESPRTLTSI
EDSDVYRMLQKDQEEPQEPRQSGSFKALQEFIDSDGTRPIVTRTVKAPTTKPTPPTGNLQ
KLPVCDKCGNGIVGTVVKARDKYRHPGCFVCSDCDVNLKQKGYFFVEGQLYCETHARARM
RPPEGHDLITTYPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaatgtcgtgttggacggtccggccccctggggatttcgcctgatgggagga
aaggacttcaatcagcccctgaccatctccaggatcactcctggcagcaaggcctccata
gccaacttgtgccctggtgacatcatcctggccatcgagggagtcccggccacagacatg
ctccactgtgaagcccagaacaaaataaaagagtccaccagccagctctgtctcactgtt
gaaaggaatgaatcaagactgtggtcacctcgtgttgtggaggaaggcagagctcaccct
tataaattgaacctagaagcagaacaacaggagtataagcctattggtaccactcacaac
cggagagctcagccattcgttgcggcagcaaatatcgacgacaagcgtcaggtggtcagt
acatcctacaacactcctataggcctttactcctcaggcaacatccaggacgccatggag
ggccagattcgaggcctcgtccaccagaagcccgagagccccagaactctgaccagcatt
gaggattctgacgtgtaccggatgttacagaaagatcaggaggaaccccaggagcctcga
cagtctggctccttcaaagccctgcaggagtttattgacagtgatggcactcgtcccatt
gtgaccaggacagtaaaagcccctacaaccaaaccaactccacccacaggaaacctgcag
aaactgcccgtctgcgacaagtgtgggaatgggattgtcgggacagtggtgaaagcacgg
gacaaatatcgtcaccctggctgctttgtgtgctctgactgtgacgtcaacctcaaacag
aagggctatttcttcgtggaggggcagctgtactgtgagactcacgctcgtgccagaatg
agaccaccggagggacacgacctcatcacgacttatccatctgcatag
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