KEGG   Lates calcarifer (barramundi perch): 108901656
Entry
108901656         CDS       T04895                                 
Name
(RefSeq) PDZ and LIM domain protein 3
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108901656
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcf04990]
    108901656
Domain-containing proteins not elsewhere classified [BR:lcf04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   108901656
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 108901656
NCBI-ProteinID: XP_018558729
UniProt: A0A4W6EUJ4
LinkDB
Position
LG5:8809180..8819922
AA seq 315 aa
MPLNVVLDGPAPWGFRLMGGKDFNQPLTISRITPGSKASIANLCPGDIILAIEGVPATDM
LHCEAQNKIKESTSQLCLTVERNESRLWSPRVVEEGRAHPYKLNLEAEQQEYKPIGTTHN
RRAQPFVAAANIDDKRQVVSTSYNTPIGLYSSGNIQDAMEGQIRGLVHQKPESPRTLTSI
EDSDVYRMLQKDQEEPQEPRQSGSFKALQEFIDSDGTRPIVTRTVKAPTTKPTPPTGNLQ
KLPVCDKCGNGIVGTVVKARDKYRHPGCFVCSDCDVNLKQKGYFFVEGQLYCETHARARM
RPPEGHDLITTYPSA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgccactcaatgtcgtgttggacggtccggccccctggggatttcgcctgatgggagga
aaggacttcaatcagcccctgaccatctccaggatcactcctggcagcaaggcctccata
gccaacttgtgccctggtgacatcatcctggccatcgagggagtcccggccacagacatg
ctccactgtgaagcccagaacaaaataaaagagtccaccagccagctctgtctcactgtt
gaaaggaatgaatcaagactgtggtcacctcgtgttgtggaggaaggcagagctcaccct
tataaattgaacctagaagcagaacaacaggagtataagcctattggtaccactcacaac
cggagagctcagccattcgttgcggcagcaaatatcgacgacaagcgtcaggtggtcagt
acatcctacaacactcctataggcctttactcctcaggcaacatccaggacgccatggag
ggccagattcgaggcctcgtccaccagaagcccgagagccccagaactctgaccagcatt
gaggattctgacgtgtaccggatgttacagaaagatcaggaggaaccccaggagcctcga
cagtctggctccttcaaagccctgcaggagtttattgacagtgatggcactcgtcccatt
gtgaccaggacagtaaaagcccctacaaccaaaccaactccacccacaggaaacctgcag
aaactgcccgtctgcgacaagtgtgggaatgggattgtcgggacagtggtgaaagcacgg
gacaaatatcgtcaccctggctgctttgtgtgctctgactgtgacgtcaacctcaaacag
aagggctatttcttcgtggaggggcagctgtactgtgagactcacgctcgtgccagaatg
agaccaccggagggacacgacctcatcacgacttatccatctgcatag

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