Lates calcarifer (barramundi perch): 108901708
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Entry
108901708 CDS
T04895
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108901708
04145 Phagosome
108901708
04137 Mitophagy - animal
108901708
04148 Efferocytosis
108901708
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108901708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901708
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901708
04031 GTP-binding proteins [BR:
lcf04031
]
108901708
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108901708
Endosome - Lysosome transport
108901708
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108901708
Exosomal proteins of other body fluids (saliva and urine)
108901708
Exosomal proteins of colorectal cancer cells
108901708
Exosomal proteins of bladder cancer cells
108901708
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108901708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
108901708
NCBI-ProteinID:
XP_018558833
UniProt:
A0A4W6BLB8
LinkDB
All DBs
Position
LG23:complement(10790958..10795421)
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGGSTRPNGAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVELQEAQVYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNDAQGGAGQGGRTRTGVDLQEAAPQGRSGQCCGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcgcggtggaggatcaaccaggcctaatggtgccgcagcagcaaacaaaatc
tgccagttcaaactggtgctgctgggggagtcggcagtgggtaagtccagcttagtgctg
cgatttgtcaaaggccagttccatgaattccaggagagcaccattggagctgccttcctc
actcagaccgtctgtctggacgacacaactgtgaagtttgagatctgggacacagcaggt
caagagcgctaccacagcttggctccaatgtactacagaggagcgcaggcagccattgtg
gtctacgacatcaccaacacagatacatttgtacgggcaaaaaactgggtgaaggagctg
cagagacaagccagccccaacatagtgattgctctggcaggcaacaaggcagacatcgca
aacaagagagccgtggagcttcaggaggcgcaagtgtatgctgatgacaacagtctactc
ttcatggagacctcagctaagactgccatgaatgtcaacgaaattttcatggctattgca
aagaagctaccgaagaacgacgctcagggtggagcaggacaaggtggacggacccggaca
ggagtggatctacaagaagccgcccctcagggccgcagcggccagtgctgcggcggcaat
tag
DBGET
integrated database retrieval system