Lates calcarifer (barramundi perch): 108901713
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Entry
108901713 CDS
T04895
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04510
Focal adhesion
lcf04517
IgSF CAM signaling
lcf04518
Integrin signaling
lcf04519
Cadherin signaling
lcf04520
Adherens junction
lcf04810
Regulation of actin cytoskeleton
lcf04820
Cytoskeleton in muscle cells
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108901713
04518 Integrin signaling
108901713
04519 Cadherin signaling
108901713
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108901713
04520 Adherens junction
108901713
09142 Cell motility
04820 Cytoskeleton in muscle cells
108901713
04810 Regulation of actin cytoskeleton
108901713
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108901713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108901713
04147 Exosome [BR:
lcf04147
]
108901713
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108901713
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108901713
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
108901713
NCBI-ProteinID:
XP_018558835
UniProt:
A0A4W6C1H0
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All DBs
Position
LG23:11333959..11360370
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQGL
DVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGEENIKALLTEAKKIAD
MCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTMDDSGVGQAAIRGLVAEGRRLANALPGPYRQE
LLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDAPNRDEVFEERAANFENHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EVVKAASDELSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELDQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGDMVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaagttgatgggaaggctattccagatctg
tcggcgccggttgctgccgtgcaggcggctgttagcaacctcgtccgggtgggtaaggag
actgtacaaactacagaggaccagatcatgaaaagggacatgccaccagcatttatcaaa
gtggagaatgcgtgcactaagctggtgcaggctgcctccatgctgaaagccgatccatac
tctgttcctgctcgggattacctcatcgatggctcgcggggcatcctctctgggacttct
gacctgctcctcacctttgatgaggcagaggtccgcaaaataatccgtgtatgcaaaggc
atccttgagtacctgaccgtggcagaggtggtggagtctatggaggacttgatcacatac
acaaagaacctgggaccaggaatgacaaagatggcaaagatgatagatgagcgacagcag
gaactcacccaccaggagcaccgcgtgatgcttgtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtatcaaaatatttgtgacaaccaagacatctggcagc
cagggcgtggaggaggccttgaagaaccgtaacttcacttttgagaagatgagtgccgag
ataaatgagatcatcagagtgctgcagcttacatcctgggatgaggacgcctgggccaac
aaggacacagaggccatgaagagggctctggggctcatcgactcaaagatggctcaagct
aaaaactggctgagggatccaaacgctcaaccaggggacgcgggcgagcaggccattcga
cagatccttgatgaagctgggaaagtcggtgaactgtgtgctgggaaggagcgcagagat
atcctgggcacagccaagaccctaggccagatgactgaccaggtgtcagagatgagggcc
agaggtcagggcgcatccccagctgccatgcagaaggcccagcaggtttcccaggggctt
gacgtgctaactggcaaggtggaaaatgctgctcgcaaactcgaggccatgactaactcc
aagcaggccatcgccaaaaggatcgatgctgcgcagaactggctggcagaccctaatggc
ggcccagagggagaggagaacatcaaggccctgctcactgaggccaaaaagatcgcagat
atgtgtgaggatcccaaagagagagatgacattttgcgctctattggagagattgctgcc
atgactgccaagctctctgatcttagaagacagggtaaaggtgacactcctgaagccaga
gctctggctaaacagatcgcaacagctctgcagaacctgcagtccaagaccaacaaagcc
gtggccaacagcaggcctgcgaaggcagctgttcatttggagggaaagattgagcaggcg
cagcgctggattgacaatcctactatggatgacagcggtgttggccaggcagccatccgc
ggcctggttgcagagggccgcaggctagccaacgctctgccgggcccgtacaggcaagag
ctgctgggtaaatgcgagcaggtggagcagctcatggcccagctggctgacctggctgcc
cgtggcgaaggggattcccctcaggcacgtgctgtggctcagcagctccaggaggccttg
aaagacctgaaagggaagatgcaagaggcaatgactcaggaggtgtctgacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccaccgctcctctagacgccccc
aacagagatgaggtctttgaggagagggctgccaactttgagaaccacgccaataagctt
ggcaccacagcagagaaggctgctgctgtcggcactgccaacaagagcacagtggaggga
atccaggctgccgtcaagtcaacaagagacttaacaccacaagtggtatctgcagctcgt
atcctgctgagaaacccaggcaaccaagctgcatatgaacattttgaaaccatgaagaat
caatggattgacaatgtggaaaaaatgacaggtttggtggacgaggccattgacaccaaa
tctctactggatgcctctgaggaggccatcaagaaagacctggataagtgccgtgtggcc
atggccaaccaccagcctcagatgctggtcgcaggcgccaccagcatcgctcgcagagcc
aaccgcatcctcctggtggcgaagcgagaggtggagaactcagaggatcctaaattcagg
gaggtggtgaaggctgcatctgatgaactgagccagacaatttctcccatggtgatggat
gctaaggcggtagctggaaatatccaggatccaagtcttcagaagggctttctggactca
ggttataaaattcttggtgctgtagcgaaggtcagggaggccttccagccacaagagccg
gacttcccaccacctcctcctgaactggatcagcttaatcttaacgatgaggcagcacca
cccaagccacctcttccagagggcgaggttcctccccccaggcctcctcctccagaggag
aaagatgaggagttccctgagcagaaggctggtgatatggttaacgagcccatgatggtg
gctgccaggcagctccacgatgaggcccgcaaatggtccagcaaaggaaatgacatcatt
ggcgctgccaaaagaatggccttgctcatggccgagatgtcacgtctggtgcgtggaggc
agcggaaacaagcgtgccctcatccagtgcgccaaggacatcgctaaggcttctgatgaa
gtcacacggctggccaaggaggtggccaagcagtgtactgacaagcgtatccggaccaac
ctgctccaggtgtgtgagcgcattcccaccatcagcacccagctcaaaatcctgtctacg
gtcaaggccaccatgttgggtcgtactaacatcagcgaggaggagtcagagcaggctact
gagatgttggtccacaatgctcagaacctgatgcagtctgtgaaagagaccgttagggag
gccgaggcagcttccattaagatccggacggacgcaggtttcaccctccactgggtcagg
aagaccccctggtaccagtaa
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