Lates calcarifer (barramundi perch): 108901772
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Entry
108901772 CDS
T04895
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108901772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108901772
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108901772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
AAA_2
RuvB_N
PRS7_OB
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
TIP49
AAA_18
RNA_helicase
AAA_3
Csa3_N
NPHP3_N
Mg_chelatase
AAA_24
bpMoxR
AAA_28
DUF5906
TsaE
NACHT
AAA_25
AAA_17
ATPase
Parvo_NS1
IstB_IS21
ATPase_2
GAS
Motif
Other DBs
NCBI-GeneID:
108901772
NCBI-ProteinID:
XP_018558907
UniProt:
A0AAJ7VKR2
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Position
LG7_1:complement(20524741..20530431)
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AA seq
389 aa
AA seq
DB search
MADSREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcagagagaaagcgctacaggactacaggaaaaaattgctcgaacataaa
gaagtagacgggcggttaaaagagttgagagagcagctgagagaacaaaccaaacagtac
gagaaatcagaaaacgacctgaaggctctgcagagtgtcggacagattgttggagaagtg
ctcaagcagctaactgaggagaaatttattgtcaaggccaccaatggcccccgatatgtg
gttggatgccgcagacagttggacaagtcacaactgaagcctggcaccagagtggctttg
gacatgaccacgctcactataatgaggtacctgcccagagaggtggatcctctggtgtac
aacatgtcccatgaggaccctggcagcgtctcctactctgagattggaggcttgtctgaa
cagatccgtgagctgagagaggtgattgagctgcctctgaccaaccctgagctcttccaa
agagtggggatcatcccccctaaaggttgcctgctctatgggcctccaggcacagggaag
actcttcttgctagagcagtggccagtcagctggactgtaacttcctcaaggtggtgtcc
agctccattgtggacaagtacattggtgaaagtgccaggctgatcagagagatgttcaac
tatgccagggaccaccagccgtgcatcatctttatggatgagatcgatgccattggcggc
cgtcgtttctctgagggaacctctgctgacagagagatccaaaggactctgatggagctg
ctgaaccagatggatggctttgatacactgcacagagtcaagatgatcatggccaccaac
agacctgacactttggaccccgcccttctgcggcccggcagattggaccgtaaaattcac
atcgaactgcccaatgaacaggctcgcctggacatcctcaagatccactctagtcctatc
accaaacacggagaaatagattttgaagccattgtgaagctgtcagatggcttcaacgga
gctgatctgagaaacgtgtgcacagaagcaggtctgtttgccatccgctctgaccgcgag
tatgtcacacaggaagacttcatgaaagctgtgcggaaggtggctgattcaaagaagctg
gagtccaagctagactacaagcctgtataa
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