Lates calcarifer (barramundi perch): 108901775
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Entry
108901775 CDS
T04895
Name
(RefSeq) DNA repair protein RAD51 homolog 2 isoform X1
KO
K10869
RAD51-like protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108901775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108901775
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
108901775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
AAA_25
RecA_N
ATPase
DnaB_C
AAA_22
ATPase_2
ABC_tran
RAD51D_N
Rad17
Motif
Other DBs
NCBI-GeneID:
108901775
NCBI-ProteinID:
XP_018558912
UniProt:
A0AAJ7QL15
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Position
LG7_1:complement(20561645..20602215)
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AA seq
390 aa
AA seq
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MATRILRRTGVSNEICERLKRREIESCKDLLSLTPVEVMNAAGLSYEKASVLLQSVSKAI
APPFTTLFWQALELWKQHSDSCFSTSLPALDKLLRGGLPRGTITEVTGPSGCGKTQMCLM
LSVLATLPKSEGGLDSSVIYIDTESAFSAERLVEIARSRFPGYFSSKERVLQMAARVHLF
RELTCQDVLNRLERLEEDIISTGAGLIILDSVASVVRKEFDTTLPGNLIHRSNLLSHEAT
TLKYLAHQFNIPVVLTNQITTHVGDQGSAVSAEVDSSFVTAALGNTWSHSVNTRLIVQYV
DAHQRQILIAKSPVAPFAVLNYTIQKQGICIDGCVISHLLSMECYSGVRVHRAESSCCSV
FPAHIHLLQKKRRDTLGWKQISSHSESGSL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgactagaatattgaggcgaactggcgtttctaacgaaatatgcgagagactgaaa
cgacgtgaaatagagagctgtaaggacctgttgtctctgactcctgttgaagtgatgaat
gctgcggggctgagctacgagaaggcctcagtgctgctgcagtcagtcagcaaagccatt
gctccgccattcaccacattgttttggcaggctctagagttgtggaagcaacactccgac
tcctgtttctccacatcgttgcctgccctggataaactgctgagaggaggcctgccccgt
gggaccatcacagaggtgacagggccgtctggctgtgggaagactcagatgtgtttgatg
ctgagtgttttggccactcttccaaagagtgagggcggcctggacagcagtgtcatctac
attgacacagagtcagctttctctgctgagaggctggtggagattgcacggagtcggttc
ccaggctacttcagctcgaaggaaagagtcctgcagatggctgcgcgggtccatctcttc
agggagctcacctgtcaagatgtcctcaacagactggagagactagaagaagacatcatc
tctactggagcaggtctaatcatcctggactctgtggcttcagtggtgagaaaggagttt
gacacaacgctgcccggtaacctgatccaccgcagcaacctgctgagccatgaggccacc
accctcaaatacctggcccaccagttcaacatacctgtggtcctgaccaaccagatcaca
actcatgtgggggatcaaggatctgccgtgtctgctgaggtggattctagcttcgtaaca
gcagctttggggaacacgtggagtcacagtgtcaacacacgtcttattgtccagtatgtg
gacgcacaccagagacagatattgatagccaagtcacctgtcgctccatttgcagtgctg
aactacaccattcagaagcagggaatctgtatagatggctgtgtgatctctcacttgctg
tccatggagtgttactctggtgtgagagttcacagagcagagtccagctgctgctcagta
ttcccagcacacatccacctactacagaagaagaggagagacactctgggatggaagcag
atctcctcacactcagaatctggaagcctttag
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