Lates calcarifer (barramundi perch): 108901794
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Entry
108901794 CDS
T04895
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108901794
09142 Cell motility
04814 Motor proteins
108901794
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108901794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901794
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901794
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108901794
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
108901794
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108901794
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108901794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
GTP_EFTU
ATP_bind_1
ABC_tran
PduV-EutP
AAA_16
AAA_29
AAA_22
ATPase
nSTAND3
nSTAND_NTPase5
NACHT
DEAD
AAA_7
SRP54
TsaE
cobW
Motif
Other DBs
NCBI-GeneID:
108901794
NCBI-ProteinID:
XP_018558949
UniProt:
A0AAJ7VKS0
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATSGRSALLSSTLTGPKSTLENSNPEEDDGQNLWSTILSEVSTHSRSKLPSGKNVLVMG
EVGSGKTTLVAKLQGVEEYMKGRGLEYLYFSVHDDDIDDHTRCNAWVLDGDLYHKGLQGV
AVPVDSIGNTLLLITVDMSRPWNALDSLQKWAAVAREHIDKLRVAPETLRELEHRLVKQF
QEYTEPGSGEDGTPQRRSEEEESVLLPLGDNTLTHNLGIPVVVVCTKCDAISTLEKEHDY
RDEHLDFIQSHIRRFCLQYGASLVYTSVKEMKNLDILYKYLVHRLYGFPFHCPAQVVERD
AVFIPSGWDNEKKIAILHENFQTVKADDSFEDVIVKPPVRKIVHEKEIQAEDDQVFLVKL
QSLLAKQPAVTAGRPVDTTSRAPTGSPRTSNRSAAANVANTMPQSGQTSEGVLANFFNSL
LTKKAGTGGPGTPGGGNNTPGTVRKSDMNITHGSKLGLSDVQAELDRISSRETDSDLSNA
NETP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcagggaggagtgcattattatcctccaccttaactggacctaagagcaca
ctggagaactccaaccctgaggaggatgatgggcagaatttatggtccaccatcctgagt
gaagtgtcaacccattcaagatcaaagctaccgtctgggaaaaatgtcctggttatgggt
gaggtgggctcggggaagaccaccttggttgcaaaactacagggtgtcgaggagtacatg
aaagggcgtggcctggaatacctctacttcagtgtccatgacgatgatattgatgaccac
actaggtgtaatgcctgggtcttagatggagacctttaccacaaaggtctgcagggcgta
gctgtgccagtggactcgattggcaacacgttgttgctgataacggttgacatgtcgcgg
ccgtggaacgccctggactccctccagaagtgggctgccgtcgctagggaacacatcgac
aaactccgggtcgccccggaaacactgcgggagctggagcacagacttgtaaaacagttc
caggagtacacagagcccggcagtggggaggatggcaccccacagaggaggagtgaagag
gaggagagcgtgctgctaccattaggagacaacacactcacacacaacctgggcatacca
gtggttgtggtctgcaccaagtgtgacgccatcagcactttggagaaggagcacgactac
agagacgaacacctggacttcatccagtcccacatcaggcgtttttgtctgcagtacggt
gcctctctggtttacacgtcagtgaaggagatgaagaacctggacatcctctacaaatat
ctggtccacagactctatggctttcccttccactgccccgcacaagtggtggaaagagac
gctgtcttcattccatcaggttgggacaatgagaaaaagattgccatacttcacgagaac
ttccagacagtaaaagcagacgacagctttgaagacgtaatagtcaaaccaccagtcaga
aagattgtacatgaaaaggagattcaggcagaagatgaccaagtgtttctggtaaaactg
cagtcgctgctcgccaaacagcccgctgtgacagcagggcgacccgtggataccactagc
agagcacccactggctcccccaggacgagtaatcgttctgcagcggccaacgtagcaaac
accatgccacagtcaggtcagaccagtgagggtgtgttggcaaacttctttaacagtcta
ctgacaaagaaggcgggtacaggggggcccgggacgccaggtggtggtaacaacactcca
ggaactgtacgcaagtcagacatgaacataacacatggttccaagctgggcctgagcgat
gtacaggcggaactggaccgcatatcaagccgggagactgactcggacttgtccaatgcc
aacgagacccct
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