Lates calcarifer (barramundi perch): 108901815
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Entry
108901815 CDS
T04895
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108901815 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
108901815 (fgd4a)
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
FYVE_2
PH_16
IBR
RHG20_PH
Mobilization_B
zf-RING_UBOX
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
108901815
NCBI-ProteinID:
XP_018558967
UniProt:
A0A4W6BWP0
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Position
LG10:20041206..20090386
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AA seq
889 aa
AA seq
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MLERSVPHRRMDGFNRVAFRKKQRSLNTGKPEEAERREKAACFQTKNGDEEACVAVKIEH
SRALGSSPACERNNPPSVQACLNRASGGTTDKSKGGVNGRGPGSRPRLQSKPQVPPKPLH
LQSPVTELSSPLGRIQRPQLRPGMEEGGGGGGGGGGVGRGAVNRERPREKHSKVSDLISR
FEENSNVEHKRDSSPLKQAISKSNNCSPAHHPQPRQTESDRNRENHSSAPAAQHKDDHTP
AANGVLAQMEQDKEKEDKEENGSVRIETAGLVNGDMGDGRTEQDEDHSPPQMDRTDTESH
TKNEDSGTTTESEHRNEEGSADHKETNEQKLFKIASELLQTEKAYVARLNLLDQVFCAKL
MEEANKGTFPVDVVKNIFSNIVSIHAFHSQFLLPDLEKRMGEWSSTPRIGDILQKLTPFL
KMYAEYVKNFDKAMELLKQWTDRSPQFKAIIQEIQSQEVCGCLTLQHHMLEPVQRVPRYE
MLLKDYLKKLPQDDPDRRDAEKSLEIIAMAATHSNSAIRKSENLKKLLEIYEMLGEEEDI
VHPSNEFIKEGHILKLAARNTSAMERYLFLFNNMLLYCVPKFSLGGPKYTVRTRIGIDGM
KVLETTNEDYPHTFQVSGKERMLELQASSEQDKADWIKAFQETIEIFQQKNESFKNALKD
VEEVSKAELGKRAPRWIRDNEVTMCMMCKEPFNALTRRRHHCRACGYVVCWKCSDNKVPL
EYDGNKMNKVCRDCFSILTGERVAEGKKKGILEIEAAQFSGSSIMCGFLQYCEKNKPWQK
VWCVIPEKECLVLYLYGAPQDVKAQCTIPLLGYSVDDTVRPTEPPASFRLSQSKSVHNFA
AESEELKQRWLKVIRVAVTGEMPECPQTNGGNANMMDNNNTQEAATDST
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcggtcagtgcctcatagaagaatggatggatttaacagagtcgcttttcgc
aaaaaacaacgaagtctgaacactgggaagccagaggaagcagagagaagagaaaaagct
gcctgtttccagaccaagaacggtgatgaagaggcctgtgtggcggtgaaaattgaacac
tccagagctctaggcagtagcccagcgtgcgagcgcaacaacccacccagcgtgcaggcg
tgtctgaatcgggcaagcggtggaacgactgacaagagcaagggaggagtcaatggaaga
ggccctggcagcaggcctcggctgcagtctaaaccacaagtgcctccaaagccactgcat
cttcagagtccggtgacggagctctcgtccccgctgggccgcatccagagaccacagtta
agaccaggcatggaagagggaggtggaggagggggaggaggaggaggagtaggaagaggg
gctgtgaaccgggagagacccagggagaaacactccaaagtgtcagacctgatcagccgc
tttgaggagaacagcaacgtagagcacaagagagacagctcgccgctcaagcaagccatc
agcaagtcgaacaactgcagcccagcccaccaccctcaaccgaggcagacggagagcgac
aggaatagggagaaccactcctccgcaccggccgcccaacacaaggatgatcacacaccg
gcggccaacggggtgctagcgcagatggagcaggacaaggagaaggaggacaaagaggag
aatggaagtgtgaggatagagactgccgggctggtaaacggagatatgggggacgggaga
acagagcaggatgaggatcattcacctccacagatggacaggactgacacagagagccac
actaagaatgaggacagtgggactacaacagaaagtgagcacaggaatgaagaagggagc
gcagaccataaggagacgaatgaacagaagctgtttaagattgccagcgagctcttgcag
acagagaaggcctatgtagcaagacttaacttgctggaccaggtattctgtgctaagctg
atggaggaggctaataagggaactttccctgtggatgtagtgaagaacatcttctccaac
atcgtctccatccacgcctttcacagccagttcctgcttccagatctggagaagcgcatg
ggagaatggtcgtccacacctcgcatcggggacatcctgcagaaactaacacccttcctc
aagatgtacgcagagtatgtgaagaatttcgacaaggccatggagctgctcaaacagtgg
actgaccgttcgccacaattcaaggccatcattcaggagatacagagtcaagaggtctgc
ggctgcctgacgcttcaacatcacatgttagagcccgtgcagagggtcccccggtatgag
atgttgctcaaagactatctgaagaagctgcctcaggacgaccccgaccgacgagatgca
gaaaaatcattagaaatcattgccatggcagctactcactccaacagcgccatacgaaaa
tctgagaatctgaagaaactgttggagatatacgagatgctgggtgaggaggaggacatc
gttcacccctctaacgagttcatcaaagagggccacatcctgaagctggcagccaggaac
acctcggccatggagagatacctcttcctgttcaacaacatgctgttgtactgcgtgccc
aaatttagcctgggaggccctaagtacacggtgaggacgcggatcggcatcgacggcatg
aaggtcctggaaacaaccaatgaggactaccctcataccttccaggtgtcagggaaggag
aggatgctagagctacaggccagctcagagcaagacaaggcagactggattaaggctttc
caggagaccattgagatcttccagcagaaaaacgagtcattcaagaacgcattaaaagac
gtggaggaagtgtcgaaagcagagctggggaagcgagcccctcgctggatccgcgacaat
gaagtgacgatgtgcatgatgtgcaaagagcctttcaacgctctgacacggcggagacac
cactgcagagcctgcggctatgtggtgtgctggaagtgttcagacaacaaagttccgctg
gaatacgatggcaacaagatgaacaaagtctgcagagactgcttctccatcctgactgga
gagagggtagccgagggcaagaagaagggcatcctggagatcgaggcagctcagttctca
ggcagcagcatcatgtgcggcttcctgcagtactgtgagaagaacaaaccctggcagaag
gtgtggtgcgtcatccctgaaaaggaatgtctggtgctttacctctacggagctccgcag
gatgtgaaggcccagtgtacaatccccctcctggggtattctgtggatgatactgtccgg
cccacggagcccccggccagcttccgtctctcccagtctaagtccgtccacaacttcgca
gctgaaagcgaggagctcaagcagcgctggctgaaagtcatccgagtggctgtgacagga
gagatgccagagtgccctcagaccaacggcggcaacgcaaacatgatggacaacaacaac
acgcaagaggcggccaccgatagcacataa
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