Lates calcarifer (barramundi perch): 108901823
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Entry
108901823 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin remodeling regulator CECR2
KO
K25830
cat eye syndrome critical region protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108901823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901823
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
CERF complex
108901823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KIAA2026_hel
DDT
Motif
Other DBs
NCBI-GeneID:
108901823
NCBI-ProteinID:
XP_018558987
UniProt:
A0AAJ7QLF8
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All DBs
Position
LG10:20158067..20193168
Genome browser
AA seq
1642 aa
AA seq
DB search
MSQGCTISVEEIQSWWEVPAIAHFCSLFRTAFNLPDFEIEELEKALSEQDLDFLGDLIAC
LLQGCYQRTDITPQAFSSYLDDIISYRWELEEGKPNPLREGPFENLPPRTQVELLHRLCD
YRLDAADVFDLLKGLDADSLRVEPLGQDGNGALYWYFYGTRMYKEEPVKRKADKISSEPP
EQTLPEKKKRGRPPKKRKLEDPQLSEEEREVSEVKTENGLEDPPPSKGRKRGVWSLVCDT
EEQWVKLAESIKDKPSPQDRHLYRVISQNFLPEISSMIEHKEREQKLKLLDPTPVRTSQR
FSEKHVKQEDEDNLKAVTEDEKKKDEELDRQVLLAEQRREEERLLQEERQREKMEKIKAV
EERAKRRKMREEKAWLLSQGKDLPPELLNLEPSSPVHRTRRNKEFYEIDDDYTALYKVLE
ALKAHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDGEYVAKEDFVADVKLMFE
NCMEYNGEDSEYTIMAESLERCFSRALLKHFPSEDGDTDEEFHISREDKERKDKKRNRSS
KHLGPESLIKATEQVQRKRNSQGGKGSTPSEEEDNRLTRPPPPPHWANSPHHPHTMHPNQ
QRIHEGDIRGIYHPGQQLRHPPGPPGPHGPHMYAQRMAMDPRFAYPAHIPRHGDPNLNRL
PRNFNMQHRMVDGHHMGPRYQMGPDPNQQQPPHQQQHPYMGPTHGPSLGPRPVALQPGPP
PEASMYPSHHHSESHPMHPMGNRFSGPDGPPQHNYPGLRPPGVGLSNMWTGMNHQERPNG
MRMQDPNMVNQRNFSYGGVPPPVGHKPWPEAAGYPHPPPNAQYQMSAGVSTQGPMSSRPP
VPHPDSSGRTRLASMLESPEMLALQQLSASSGPPAGAPHQHMGNFQQPGPPSGIGSIPAH
PSQQPPPAPEVQLLRPARDNGPDSQPSQQTDMQPKGTTPENKMAANNICNEASTHKNTVS
INQEHPPNPSPTGCHSGAAEGMQSPPGPNLSRSQENPPGLLQSSTEGHKQEVDRPLSSST
NSATTVSSQLNASNINSTDPTPPNPPQHAQNSPQQNALLPQNVLPLHVSASQNPTQQMSE
NNLPHMQNAHQQSEHQQNVQKQQQQPQATQSTPPQCHPPSSPQLLTQNAQQHNSLLPPHH
VPQNISPQRPTQNSPMHGMPQSATQGAQPGPPQPAPLTSLPPSHPTPLLPSQPSPADHGN
QRPCEPTSRADTEATAVPPQHTMMKPGPPNGIYKHQNFSPNHHQTQLVGSNAGMQAQRGP
SPGHNPAIPPNSQGQVNGAMGPYSMGNPPHPHYSQTNMTRSMPPSAHHPYHNQATNPLHN
AAHHPTYHQQGGTAYSYHMPGQQHPQAHPNMYPPHQYQQQHYYPQPHPQAQTHNQASGRG
GYPPEEWHRPHYQPRQPMPPNAFLPAASARGNGQSKESSVSPLGSEGSSRASLVSPGPVS
EAGPHPGGPEEGRGENRVQSSGGGSSGGSPARQAQTESSERPESPKEILDLDSHNAAARR
RSAHPPQQQRPPASAAHMASGFMYDPRAMHPGMQQGGVPPPHLMSQARGVGNGGSYPGQP
YPDPGRYAAQRPHPHLMEALQRPQQLPYSPGQTRMAMFRHHRPTGHFQGMMIQQRGLAPE
HFLHPGQQMMAAPGGPSSKQGV
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagggatgtacaatttctgtggaagagatccagtcttggtgggaagtccccgcc
atagcccacttctgttcgctgttcaggacagcgttcaaccttccagactttgaaatagag
gagttggagaaagccctgtcagagcaggacttggacttcctcggggacctcattgcctgt
ctgttgcagggatgctaccagcgcactgacatcaccccccaggcatttagcagttacctg
gatgacatcatcagctaccggtgggaactggaagaggggaagcccaacccacttagagag
gggcccttcgagaatctccctcctcgcactcaggtggaactgctgcaccgactctgcgat
taccgtctggatgctgctgatgtctttgatctgcttaagggactggatgcagacagcctg
agggttgaaccgctggggcaagatggaaatggagccctctactggtatttttacggcact
cgtatgtacaaagaagagccagtcaagaggaaagcagacaagatcagcagtgaaccccct
gaacaaacattaccagagaaaaagaaaaggggaagaccaccaaagaagcgaaagctggaa
gaccctcagctaagtgaggaggaaagagaagtgtcagaagtcaagacagagaatggactg
gaggatcccccaccaagcaaaggtcgtaagcgaggcgtttggtcccttgtgtgtgataca
gaggaacagtgggtcaaactggcagaaagcatcaaggacaaaccctccccacaggaccgc
cacctctaccgtgtcatcagccagaacttcctgcccgagatcagcagcatgattgagcac
aaggagcgggagcagaaactgaaacttctagacccaaccccagttcgcacatcacagcgg
ttctctgaaaaacacgttaagcaagaggacgaggacaatctgaaggcagtaacagaggat
gagaagaagaaagatgaagagctggacaggcaggtactgctggctgagcagcgacgagaa
gaggagaggcttctgcaagaggaacggcagcgcgagaagatggaaaagatcaaagctgtg
gaagaacgagcaaagaggcggaagatgcgagaggaaaaggcctggttattgtctcaagga
aaagacctgccacctgaactcctgaatctggagccttcctcccctgtccacagaacacgc
aggaataaggaattctatgaaattgatgacgactacactgctttatacaaagtacttgag
gccctgaaagcccataaagatgcttggcctttcctggagcctgtggatgactcctatgcc
cccaattaccacgagatcatccagactcccatggacctgtccaccattgagaggaagctc
aatgatggagagtacgttgctaaggaggactttgttgctgacgtgaagctcatgtttgaa
aactgcatggagtacaatggagaagacagtgagtacaccatcatggcagagtctttagaa
cggtgttttagtcgggccctattaaaacactttccatcagaggatggtgacacagacgag
gaatttcacatcagtcgagaagacaaggagcgcaaggacaaaaagcgcaaccgtagcagt
aaacatttgggacctgaaagtctcatcaaggccactgaacaagtccaacgtaagcgaaac
tcccaggggggcaagggcagcacaccctctgaggaagaggacaacaggctgacacgacca
cctcctccccctcactgggccaatagcccccatcacccccacaccatgcatccgaaccaa
caacgcattcatgaaggagacattaggggcatctatcatccagggcaacagctccgtcat
ccacctggtccccctggtcctcatggtccacacatgtatgcccaaagaatggctatggat
ccccgcttcgcctacccagctcacattcccaggcatggagaccccaacctgaaccgcttg
ccccgcaactttaacatgcagcatcgcatggttgatggacatcacatgggtcccaggtat
caaatgggtccagatcctaaccagcagcagcctccacaccagcagcagcacccctacatg
ggtccaactcatggtccatctttaggcccacgtcccgtggccctgcagcctggacctcct
cctgaagccagcatgtacccatcccaccaccattcagagagccaccccatgcatcccatg
ggcaacagattttcaggaccagatggaccacctcagcacaactacccaggcttgaggcct
cctggtgtgggcctatcgaacatgtggactggtatgaatcaccaggagagacccaatggg
atgcgcatgcaagatcccaacatggtgaaccagcgcaactttagctacggtggagtccca
cctccagtgggacataaaccatggccagaagctgctggataccctcaccctcctcccaat
gcccagtatcaaatgtctgcaggggtcagcacccaggggcccatgtcctcacgtccccct
gttccccacccagactcctctggtaggacacgcttggcttctatgctggaaagccccgag
atgctggccctgcagcagctgtcagcctcttctggaccccctgctggtgcccctcatcag
cacatgggcaactttcagcagcctgggcccccatcaggaattggcagcatcccagctcac
ccctctcagcagcctccccctgcccctgaggttcagctgctgcgtcctgctagagacaat
gggccagacagccagccttcccaacagacggacatgcagcccaaaggcacaacaccagag
aacaaaatggctgccaacaacatttgtaatgaagcttcaacacacaaaaacactgtttca
attaatcaagagcacccgcccaaccctagtcccacaggatgccacagtggggcagcagag
ggaatgcagagccccccaggccctaacttgagcagatcacaagagaatccgccaggcctc
ctgcagagttcaacagagggccacaagcaggaggtcgataggccactgtcctcctcaaca
aatagtgccactactgtttcatcccaactcaacgcaagtaacatcaactccactgatccc
actccgcccaacccccctcagcatgcacagaacagtccacagcaaaatgcacttcttccc
cagaatgtactgccactgcatgtatcagcatcccagaatcccactcagcaaatgtcagag
aacaacttaccacacatgcagaatgcacatcagcaaagtgaacaccagcagaacgtccaa
aaacagcagcagcaacctcaggcaacccagagtacccccccacaatgccaccctcctagc
tctccccagctgctgacccagaatgctcagcaacacaattctctgctacctcctcatcat
gtcccccaaaatatctctccacaacgtccaacacagaacagccccatgcatgggatgcca
cagagtgccacacaaggagcccagcctggacctcctcagccagctcctctcacatctttg
ccacccagtcatcctaccccactattaccctcccagcctagcccggcagaccatgggaat
caaagaccttgtgaacctacaagtagagcggacacagaagctactgctgttcctccacag
cacaccatgatgaaacctgggcctccaaatggtatttacaaacaccagaatttcagcccc
aatcaccatcaaacccagctagtgggtagtaatgcaggtatgcaggctcagagagggccc
tcacctggtcacaacccagccattcctcctaactcccaaggtcaggtaaatggagctatg
ggtccatacagtatggggaaccctccacatccacactacagccagaccaacatgaccagg
tccatgcctccctctgctcaccacccttaccacaaccaggctactaaccccctccacaat
gctgctcaccaccccacctaccaccagcagggagggactgcctactcctaccacatgccg
ggccaacagcaccctcaggcccaccccaacatgtacccacctcaccagtaccagcagcaa
cactactacccccagccccacccgcaagctcagacccacaaccaggccagcggcagaggg
ggttatcctccagaggaatggcatcggcctcattatcagcctcgccagccaatgccacct
aatgccttcctacctgcagccagtgctagaggcaacggccagtcgaaggagagcagtgtg
tcaccgctgggctctgagggctccagtcgtgctagtttagtgtctcctggtcctgtgtct
gaagcagggccacaccctggaggcccagaggaggggaggggtgaaaacagggtgcagtcc
agtggaggcggcagcagcgggggcagtccagcaaggcaggctcagactgagagctcagag
cgacctgaaagcccaaaagaaatcctggacctcgacagccataatgctgccgcccgccgc
cgtagcgcccatccacctcaacagcaacgcccacctgcctctgctgcacacatggcgtct
ggcttcatgtacgaccctcgtgccatgcaccctgggatgcagcaaggtggcgttcctcca
ccacacttgatgtctcaggcccgaggagttggaaacgggggctcttaccctggccagcca
taccctgatccagggcgctacgctgcccaacgacctcacccacacctgatggaggctctg
cagcggccacagcagctgccatactctccaggtcagacacgcatggccatgttccgacat
cacaggcccacggggcacttccagggcatgatgattcagcagagaggcctggcaccagaa
cacttcctacacccagggcaacaaatgatggctgctccaggcggccctagcagtaaacag
ggagtgtga
DBGET
integrated database retrieval system
