Lates calcarifer (barramundi perch): 108901848
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Entry
108901848 CDS
T04895
Name
(RefSeq) heat shock factor protein 4
KO
K09417
heat shock transcription factor 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901848
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108901848
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
YscO
Glyco_transf_41
Translat_reg
CTD12
Motif
Other DBs
NCBI-GeneID:
108901848
NCBI-ProteinID:
XP_018559019
UniProt:
A0AAJ7QL89
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Position
LG10:21361661..21379641
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AA seq
441 aa
AA seq
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MQESPGAMGVDGSYASNVPAFLTKLWTLVEDPDTNHLICWSATGTSFHVFDQGRFAKEVL
PKYFKHNNMASFVRQLNMYGFRKVVNIEQSGLVKPERDDTEFQHLYFLQGHEHMLEHIKR
KVSIVKSEETKVRQEDLSKLLYEVQLLRTQQDNMECQMQDMKQQNEVLWREVVSLRQNHT
QQQKVMNKLIQFLFSQMQSNTPSTVGLKRKLPLMLDDGSPSPPASKFSHSHPMEPMHEPF
YIQSPSSDTASCSTSGLTGGPIISDVTDMSQASMALQMQPDETREKCMMLIKEEPVSPGV
RGGGKGGSVGGGEAVALTSSCEVCSSEPPVLPVAMVQSVLEGRGSTASVMERRSKRPALD
RVEVSDAVENVDMSLEELQQLLLRSHQQSTVEAGTNAVMDPFSLSLPLTEWNFTEMESNL
KSYMFQNQEAEAFPATGCEEQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtctccaggtgccatgggtgtagatggcagctatgccagcaatgttccagcc
ttcctcaccaagctgtggaccctggttgaggacccagataccaaccacctcatctgctgg
agcgctactgggactagttttcatgtatttgaccaaggacgatttgccaaagaagtcctg
ccaaagtactttaaacacaataatatggcaagcttcgttcgacagctcaacatgtatggt
ttccgtaaagtggtgaacattgagcagagcggtctggtgaagcctgagagagacgacaca
gaattccaacacctgtacttcctccaggggcatgagcacatgctggaacacatcaagagg
aaggtatccatagtaaagagtgaggagaccaaagttcgccaggaggacctcagtaaactg
ctgtatgaagttcaacttctcagaacacaacaggacaacatggagtgtcagatgcaggac
atgaaacagcagaatgaagtgctgtggagagaggtggtctcattgagacagaaccacaca
cagcaacagaaagtcatgaacaagctgattcagtttctgttcagccagatgcagtccaac
acacccagcactgtgggcctaaagagaaagctgcccctgatgttggacgatggctctcca
agtcctcctgcctccaagttcagccatagtcacccaatggagccaatgcatgaacccttc
tacattcagtcgccatccagtgacactgcttcttgctctactagtggactaacaggagga
ccaatcatatcagatgttactgacatgtctcaggccagcatggccctgcagatgcaacct
gatgaaaccagggagaagtgtatgatgcttatcaaagaagagcctgtgagtccaggtgtg
agaggaggagggaaaggaggcagtgtaggaggaggagaggctgtagcattgacctcctcc
tgtgaggtgtgctcctcagaacctcctgttctccctgtcgcaatggtccagtctgttctg
gaggggcgaggctctacggcctctgtgatggagaggaggagtaagagacccgctctggac
agagtggaggtttcagatgcagtggagaacgtggatatgagcctggaggagctacagcag
ctgctgctcaggagccatcaacagagtactgtggaagctgggactaatgctgtcatggat
cccttcagtttaagcctacctctgactgaatggaacttcacagagatggagtccaacctc
aaatcatacatgttccagaatcaggaagcggaggcttttccagccactggctgcgaagaa
cagtga
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