Lates calcarifer (barramundi perch): 108901884
Help
Entry
108901884 CDS
T04895
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108901884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108901884
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108901884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
108901884
NCBI-ProteinID:
XP_018559062
UniProt:
A0A4W6DCR3
LinkDB
All DBs
Position
LG10:complement(21237816..21267684)
Genome browser
AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTAPGRSALDS
VEVAYGRQIYIFNEKIVNGHIQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQALSFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEEHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
DRRLSPTSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDISDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHMALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVAIAERYRSQGIAGEKSVDSTFYLLLDLMTFFDEYHAGHVDRAYDVMERLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRPQRTIE
DRDMQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggttttggggagctgctccagcaggcagagcagctggctgcagagaca
gaagcagtgtcagagctgccgcacgttgagaggaacctccaggagatccagcaggccggg
gagaggcttcgttcccgcaccctgacccgcacctcacaagatgctgctgacgtaaaagcg
tcaatcctcctcggttccagaggcttagacatcttccacatctctcagaggctggaaagt
ctaagtgctgccaccacatttgagcccctggagccagttaaagacactgacatacagggc
ttcttgaagaacgagagggacaacgccctcctgtcagccattgaggagtctcgccgcagg
acgttcctgttggctgaggagtaccatcgtgaatccatgctggtccaatgggagcaggtt
aagcagagagttctgcacacgttactcggagcaggggaggacgcactggacttcagtcaa
gatgtggagcccagttttgtgagtgaagtgactgctccaggaaggagtgcgttggacagc
gtagaggtggcctatggacgacagatctacattttcaatgagaagatagtgaatggtcac
attcagcctaatctgggagatttatgtgcctctgtagcagaaagcctggatgacaagaat
gtatcggacatgtggctgatggtgaagcagatgacggatgtgttgctggttccagctaaa
gacaccctgaagagtcgcacttcagttgaaatgcaaatggcctttgtacgacaggcactc
agcttccttgagaacagttataaaaactacaccatggttacggtgtttggcaacctccat
caagcccaattaggaggggtgccaggaacataccaactagtccgcagtttcctcaacatt
aagctaccagggcccctgcctggtatgcaggatggggagatagaggaacacccagtgtgg
gctgtgatctactattgtctgcgttgtggagatctgaatgcagccatgcaggtggtgaac
agagtgcagcatcagctaggggacttcaagacctggttccaggagtatatgaacagccct
gacagacgtctctctccgacttcagagaacaagctgcgtctccactaccgcagagtactg
aggaacagcgctgacccctacaagagagccgtctactgcctgattggaaaatgtgacatc
agtgacaaccacggagaggtggcagacaagactgaagactacctctggcttaagttgaac
caggtgtgttttgatgatgacggcagcagctctcctcaggacagactgaccctgccacag
ttacagaaacagctgctggaggactatggggagtcccatttctctgcgagccagcagcct
ttcctatatttccaagtattgttcctcacagctcagtttgaggcagcgatcgctttcttg
ttccgcgttgagagactgcggagtcatgccgtgcacatggctctggtcctgtacgagcta
cggctgctgctgaagtcatccggccaaagtgcccagctgttgagtcaggagcccggggac
cctcccatgatacggcgcctcaacttcatccgtctgctcatgctttacactcgcaagttt
gaatctactgatccacgggaagccctgcagtacttctacttcttacgcaatgagaaggac
agccagggagaaaacatgttcatgcgttgcgtcagtgagcttgttattgagagtcgagag
ttcgacatgctgctggggagattagagaaggacggcagcaggaagcctggagtcatagat
aagtttgctggggacaccagagccatcatcagtaaagtggctctagaggcagagaacaag
ggcttgtttgaggaggcagtcagactctatgagctggccaagaacccagataaggtgctg
gagttgatgaacagattgttgagtccggtcattgcccaggtcagcgctcctcagtccaac
aaggagaggctaaaaaacactgcagtggccattgctgagaggtatcgctctcaaggcata
gcaggagagaaatcagtcgatagtactttctacctgctcttagacctgatgacatttttt
gatgagtaccacgcaggtcacgtcgatagagcctatgacgtgatggagcgtttaaagctt
cttcctctcagtcaggacagtgtggaggagagagtggctgctttcaggaacttcagcgat
gaggtgcggcacaacctgtccgaggtgctgttggccaccatgaacatcctgttcacccag
tacaaacgcctgaagggggcgccagcaggcacaccaggacgaccacagaggaccatagag
gacagagacatgcaactgcgcagccaggccagagccctgatcaccttcgctggtatgatt
ccctacaacatggctggggacaccaacgcaagactggtgcagatggaattactaatgaac
tga
DBGET
integrated database retrieval system
