Lates calcarifer (barramundi perch): 108901887
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Entry
108901887 CDS
T04895
Symbol
map1lc3b
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
KO
K10435
microtubule-associated protein 1 light chain
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04140
Autophagy - animal
lcf04216
Ferroptosis
lcf04371
Apelin signaling pathway
lcf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108901887 (map1lc3b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108901887 (map1lc3b)
04137 Mitophagy - animal
108901887 (map1lc3b)
09143 Cell growth and death
04216 Ferroptosis
108901887 (map1lc3b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108901887 (map1lc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901887 (map1lc3b)
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108901887 (map1lc3b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108901887 (map1lc3b)
Membrane trafficking [BR:
lcf04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108901887 (map1lc3b)
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108901887 (map1lc3b)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
108901887 (map1lc3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
BRAP2
Motif
Other DBs
NCBI-GeneID:
108901887
NCBI-ProteinID:
XP_018559067
UniProt:
A0AAJ7QLP3
LinkDB
All DBs
Position
LG10:23039784..23047464
Genome browser
AA seq
126 aa
AA seq
DB search
MPSEKTFKQRRTYEQRVEDVRLIREQHPNKIPVIIERYKGEKQLPILDKTKFLVPDHVNM
SELIKIIRRRLQLNSNQAFFLLVNGHSMVSVSAAISEVYERERDQDGFLYMVYASQETFG
SATTAQ
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaaaaaaccttcaaacaaagaaggacatacgaacagagagtagaagatgtc
agactgatccgggagcagcaccctaacaagataccggtgatcattgagaggtataaagga
gaaaaacaacttcccatcctggacaagaccaagttcctggtgcccgaccacgtcaacatg
agtgagctcattaagattatcaggaggcgcctccagctaaactcaaaccaggctttcttc
ttgctggtcaacggccacagcatggtgtctgtgtcggctgccatctctgaggtgtacgag
cgggagcgggaccaagatggcttcctctacatggtgtatgcctcccaggagacgttcggc
tctgccacaaccgcccagtga
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