Lates calcarifer (barramundi perch): 108901891
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Entry
108901891 CDS
T04895
Symbol
phaf1
Name
(RefSeq) UPF0183 protein C16orf70 homolog isoform X1
KO
K27411
phagosome assembly factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901891 (phaf1)
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108901891 (phaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
108901891
NCBI-ProteinID:
XP_018559076
UniProt:
A0A4W6DF08
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Position
LG10:21545972..21557739
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AA seq
428 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAISILQKHCRIIKNVQVLYSEQTPLSHDLILNL
TQDGIKLLFDATNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFALGLASLQIPHGAMVKRMHIYTGNNLQ
ETRAPAMPLACFLGNIYAECVDVLRDRAGPLGLKLRLLTAGGCGPGVMADAKVRSLERSI
YFGDSCQDVLGALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDS
TTHLVKKFVLHTNYPGHYNFNIYHRCDFKIPLVIKKEGTDSQTEDCILTTYSKWDQIQEL
LGHPMEKPVVLHRSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAPRTASQAR
PESSSSSH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaggtggtgcctgagagatcactaggaaatgagcaatgggaattcgcc
ttagggatgccattggcccaggccatctccattcttcagaaacactgccgcatcatcaag
aatgtccaggtgctatacagtgaacagacaccactcagccatgacctcatactgaacttg
actcaggatgggattaaactgctgtttgatgccacgaatcagagactcaaggtgattgaa
gtgtatgacctgagcaaagtcaagttgaaatactgtggagtccatttcaactctcaggcc
attgcccccacaatagagcaaatagaccagtcatttggagctacacaccctggagtttac
aatgcagcagagcagttgttccatctcaactttcgaggactgtccttctccttccaactg
gactcttggaatgaagctccaaaatacgagcctaactttgccctgggtttggcctccctg
cagattccacatggggccatggtcaagaggatgcacatctacactggcaacaacctgcag
gaaacaagagctccggcaatgcctttggcttgtttccttggcaacatctatgcagagtgt
gtggatgtcctgagagatcgggcagggcccctggggctcaaactccgccttctcactgca
ggaggctgtggtcctggtgtgatggctgatgctaaagtgaggtccctagagaggagcatc
tactttggagattcctgtcaggatgtacttggtgctctgggttcaccacataaagtcttc
tacaagtctgaggacaagatgaagatccactctccatcacctcacaagcaggttccctct
aaatgtaacgactacttcttcaactacttcacccttggagtggatatcctgtttgactcg
acaactcacctggttaagaagtttgtcctccataccaactaccctggacattacaacttc
aatatatatcatcgatgcgactttaagattccactagtcatcaaaaaagaaggaactgat
tctcagacagaggactgcatcttaaccacctacagcaagtgggatcagattcaggaactg
cttggtcacccgatggaaaaacctgtagtgctccacaggtcctcttcagccaataatacc
aatccattcggctctaccttctgttttggactgcagaggatgatctttgaggtgatgcag
aataaccacatagcatcagtgaccctctacggtgctccacggactgccagtcaagcccga
cctgagtccagcagtagttcccactga
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