Lates calcarifer (barramundi perch): 108901894
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Entry
108901894 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108901894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108901894
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108901894
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108901894
NCBI-ProteinID:
XP_018559080
UniProt:
A0AAJ7QL64
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Position
LG10:22333245..22335470
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AA seq
275 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKAAAALPSRGXPRPDGRQRDQVDVRPVFVRCGLVSQAK
GSAYIEAGNTKLMCCVYGPKETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKD
FSLMLQESLQPAVCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVL
GCSIRQDGASYVVDPTYTEQNSCSSVSSENQGGLTVAFLPSLNQISGLQSDGEMTEETLT
AGVRTCIEGCYKLYPVVQQALTKAVRRAALPPPES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacaccaaacgtgttcgcgggccagaggtatcccaaagtccatctctgttt
ttgtgcaaagctgcggccgctctcccgtcgcgcggcnnccccagaccggacggtcggcag
cgggatcaagtggacgtccggcccgtttttgtccggtgcgggctggttagccaggctaaa
gggtccgcgtacatcgaagctggcaacaccaagttgatgtgctgcgtgtatggccccaaa
gagaccgagcggaaagatgagaccgacatgaaatgtggaagattgacaactgacatgcgt
ttcgccccgttttcctgcccggagaggggctcctggatccaagggagtcaggacaaggac
ttctccctaatgctacaggagagcctacagccagcagtgtgcctccacaaatacccccgc
tctcagattgaggtcaatgtgatggttcttgagaacagcggttcagttctggcccatgca
gtcacatgcgcttctcttgctcttgcagatgcagggattgaaatgtatgatctggtgctt
ggttgttccatacgccaggatggcgcctcttacgtggttgatcctacttacacagagcaa
aacagctgcagctcagtcagcagcgagaaccagggaggtctgactgttgctttcctcccc
agcctgaaccagatttctgggctgcaatcagatggagaaatgactgaagagactctgaca
gccggggttcggacctgcattgagggatgctataaactgtacccagtcgtccaacaagct
ctcaccaaagctgtgcgcagggctgctctcccgccaccagagagctga
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