Lates calcarifer (barramundi perch): 108901918
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Entry
108901918 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor E2F4
KO
K04682
transcription factor E2F4/5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
lcf04218
Cellular senescence
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108901918
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108901918
04218 Cellular senescence
108901918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901918
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
108901918
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
TonB_N
Motif
Other DBs
NCBI-GeneID:
108901918
NCBI-ProteinID:
XP_050929513
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Position
LG10:21146953..21155824
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AA seq
393 aa
AA seq
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MMELESASNRGELGAVGDSLQPQTPSRHEKSLGLLTTKFVTLLQEAKDGVLDLKAAADTL
AVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIDLKAELDDLAIR
EHELDQQRVWVQQSIKNVTDDSNNSPMAYVKHEDLCGAFKGDTLLAIRAPIGTQLEVPIP
EATLNGQRKYQIRLKSSSGPIEVLLVNKDPSSASPVVLPVPPPDDILQNLPAPPPTSQPV
TAASTQVPKAAPVTSTKPGPATTSATAANQTISVTEVTSTTPLTPTTDTPATVTQQLQSS
ASLDGPASSSASAVFEPIKSDPSELLDFPKELSEMFDPTREIMSGDLLEDLMSSEVFSPL
LRLSPPPSDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctggagtcggccagtaacagaggcgaactgggagcagtgggggattcgctg
cagccacagaccccgagcaggcacgaaaagagcctgggactgctcaccaccaagtttgtg
actttactgcaggaggcgaaggacggagtgctggatctgaaagctgctgcagacaccttg
gcagtgcggcagaaacgacgtatttatgacatcactaatgtgctggagggaattggactg
atagagaagaagtccaagaacagtatccaatggaagggtgtaggtccaggttgtaacacc
agggagatagctgacaagctgattgatctgaaggcagagctagatgatttggctatcagg
gaacacgagctggaccagcagagagtctgggtccaacagagcatcaagaacgtcacagat
gactcaaacaacagccctatggcatatgtaaaacacgaggacctctgtggagctttcaaa
ggagacacactcctagcaatccgtgctcccattggtacacaactagaggtgcccatacca
gaagctaccctcaacgggcaaaggaaataccagatccgtctcaagagttcatctggtcct
atcgaggttttgctggtcaataaggacccgtccagtgcctctcctgttgttttgcccgtc
cctcctccagatgacatccttcagaacctcccagcaccaccacctacctcccagccggtc
acagctgcctccacacaggtccccaaagcagctccagtcacctctacaaaacctggtcct
gccacaacatcagccacagcagccaaccagacaatctcagtgacagaagtgacaagcacc
acgccactcaccccaacaacagatacacctgctacagtcactcagcagcttcagtcctct
gcctcattggatggacctgcatcctcttctgcctctgcagtatttgaaccaattaagtca
gatccctctgaattactggactttcccaaagagctctctgaaatgtttgatccaacaaga
gagatcatgagtggagatttgttggaggacttaatgtcatcagaagtgttctctcctctc
ctccgcctatcccctccacccagtgaccatgactatatatacaacctggatgagacagaa
ggcctgtgtgacctctttgacgtccccattctcaacctctga
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