KEGG   Lates calcarifer (barramundi perch): 108901940
Entry
108901940         CDS       T04895                                 
Name
(RefSeq) charged multivesicular body protein 1a
  KO
K12197  charged multivesicular body protein 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03272  Virion - Hepatitis viruses
lcf04144  Endocytosis
lcf04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    108901940
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108901940
  09143 Cell growth and death
   04217 Necroptosis
    108901940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108901940
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108901940
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108901940
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108901940
  Exosomal proteins of other body fluids (saliva and urine)
   108901940
  Exosomal proteins of colorectal cancer cells
   108901940
SSDB
Motif
Pfam: Snf7 Ist1 FliG_N OpuAC Spore_YpjB
Other DBs
NCBI-GeneID: 108901940
NCBI-ProteinID: XP_018559139
UniProt: A0A4W6EL83
LinkDB
Position
LG10:25461690..25468462
AA seq 198 aa
MDETLFQLKFTSKQLERLAKKAEKESEKEQAKVKKALQQKNVECARVYAENAIRKKNEGL
NWLRMASRVDAVASKVQTAVTMKGVTKNMGQVTKALDKALSSMDLQKVSAVMDKFESQVQ
NLDVHTSVMEDSMSSAMTLTTPQEQVDDLIHQIAEESGLEVMDQLNQLPAGGTSVGAESS
RNQEKEDQLSRRLAALRN
NT seq 597 nt   +upstreamnt  +downstreamnt
atggatgaaacactcttccagctaaagtttacttccaagcagcttgagaggctggccaag
aaggcagagaaggaatctgaaaaagagcaggccaaggtcaagaaggctttgcaacagaaa
aatgtggaatgtgccagagtttatgcagagaacgccatccgcaaaaaaaatgaaggtctt
aattggctgcgcatggcgtcacgcgtcgacgcggtggcctctaaagtccagactgctgtc
accatgaaaggagtgaccaaaaacatgggccaggtgaccaaggccctagacaaagctctg
agctccatggacctccagaaggtgtctgcagtcatggacaagtttgaaagtcaagtacag
aaccttgacgtccacacctcagtgatggaggactccatgagctcggcaatgacactgacc
acgcctcaggagcaggtggatgacctgatccatcaaatagcagaggagagtggcctggag
gtgatggaccagctcaaccagttgccagcaggaggaacctcagtgggtgcagagagctca
cggaaccaagagaaggaggaccagctgtctcgacgattggctgctctacggaactga

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