Lates calcarifer (barramundi perch): 108901951
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Entry
108901951 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: P3 protein
KO
K14343
solute carrier family 10 (sodium/bile acid cotransporter), member 3/5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108901951
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
108901951
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GFIT
Motif
Pfam:
NTCP5_P3_N
SBF
Motif
Other DBs
NCBI-GeneID:
108901951
NCBI-ProteinID:
XP_018559149
UniProt:
A0AAJ7QLT4
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Position
LG10:25472080..25474518
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AA seq
471 aa
AA seq
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MRTLFTLCCLFLITGGADRAWATGNLTVDSSDQSNLTADSGTRYIRIGDGSSQEFEFPEN
TNGVIVISSQYRSAAANRKGRQSWKQTVKVRSLDPEVLSILNVTDSGHTGPAKSYIISIR
SGFPGRAQLQIQLLDLDQDSVPVLIEERTDYSIRVAPGNDDPATRLIQSGGLSHFSENPV
LFALLPLIFVNKCAFGCKVEVEVLRGLLKSPVPLLLGVLGQFLVMPLYAYCVSRLASLPK
PLSLGLVITCSAPGGGGGYLYSLLLGGDVTLAISMTLVSTVVAAAAMPLSSALYGRLLGV
HAALHVPFVKILGTLLFIAIPISLGMLVKLRLPALTRVLLALIRPFSFVLIIGGIFMAYQ
MGASILANVRPQIVAVGVTVPLLGLVVGAVLAKLAGLAPPQRKTVSIEVGVQNSLLALAV
MQLSFRRAEADFASQXPFIVALSSTSEMLLIVLGYFAQRRLCGSAVPRSDA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgctatttacactctgttgtctcttcctcatcaccggcggagcggaccgggcg
tgggccaccggaaacctcacagtcgacagcagcgaccagagcaacctgacggccgacagc
ggcaccaggtacatcagaattggggacggatcgtcgcaggaatttgagtttcctgaaaac
accaacggcgtgattgtaatttccagccagtaccggagcgccgcggccaacaggaagggc
cgccagagctggaagcagacggtcaaagtccgctccctggacccggaggttctctccatc
cttaatgtcacggacagcggccacacaggtccggccaagagctacattatcagcatccgc
tccgggttccccggcagggctcagctgcagatccagctactggacctggaccaggactcg
gtgccggttctgatcgaagagaggacggattattccatcagagtggcgcctggtaacgat
gacccggccacccggctcatccagtcgggtggcctgtcccatttctctgagaaccctgtg
ctgtttgccttgctgcccctcatcttcgtcaacaagtgtgccttcggctgcaaggtggag
gtggaggtcctgcggggtctgctgaagagccccgtgcctctgctcctaggagtgctgggc
cagttcctggtgatgccgctgtacgcttactgtgtgtcccggctggcgtcactgcccaaa
ccgctttctctgggcctggtcatcacctgctctgctccaggtggtgggggcggctacctg
tacagcctgctgctgggtggggatgtcaccctggctatctccatgaccctggtctccaca
gtggtggcagcagcagccatgcctctgtcatcagctctgtatggccggttgctaggggtg
cacgccgccctccatgtgccgttcgtgaagatcctcggcaccctcctgttcatcgccatt
cccatctctctgggcatgctggtgaagctgcgcctacccgctctcacgcgcgtcctgctc
gcactcatacgacccttcagcttcgtgctcatcataggtggcatcttcatggcctaccaa
atgggtgcgtccatcctggccaacgtcaggccccagattgtggcggtgggagtgacggtg
cctttgctggggctggtggtcggggccgtgctggcaaagctggcgggtctggccccaccg
cagaggaagacggtcagtatcgaggtgggcgtccagaacagcctgctggccctcgccgtc
atgcagctgtcttttcgccgggcagaggccgacttcgcatcccagngccccttcatcgtg
gccctcagcagcacctcagagatgctgctcatcgttctgggatactttgcccagagaagg
ttgtgtggttctgccgtccccaggagtgacgcctga
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