Lates calcarifer (barramundi perch): 108902011
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Entry
108902011 CDS
T04895
Name
(RefSeq) SAM and SH3 domain-containing protein 1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108902011
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108902011
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_1
SAM_2
SH3_2
SH3_1
AKAP95
Motif
Other DBs
NCBI-GeneID:
108902011
NCBI-ProteinID:
XP_018559225
UniProt:
A0AAJ7QLX9
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Position
LG19:18951429..18994372
Genome browser
AA seq
1091 aa
AA seq
DB search
MSQGPNLVLEWLSQLHLAQYVESFIDNGYDDLEVCKQIGEPDLDAIGVRIQYHRHRLLTA
VQRLKEEDERKAPGYYFTLEPLNASTCRHTSHSNREDDFRTLGSHTRTTGIHQASCPGNH
NLRFTDCNDFVTYPKLKLKVLIRDKLAKDGINLGEAPYTYKDGSVGNLDDLAQEYSQYYG
TSLSDVCERMEELRKRKVVHDAEMGKIDSVATSVQLRSQIQESLGLSSTTSTPETERRFP
VHKSSSDDGSSGGKWDGKRKSKSFWQSFRKSQKGVMRQISKGDDVGFVASEITMSDEERI
QLMMMVKENMISIEEALARLKEFEIQNRQTCRSDLTEWTDPSSPNTNESFNCNTTEQEES
ATFRRLHKLVNSTRKVKKKLIRIDESKRPGAEESLNTDGLPCGDASTSLYSGVLKKHAVC
PVDSLASALQEQLIYDRDSDSLTTSPSSSSLDTCSSQKIFQAFSKSSESPVLQETNVTGE
VREPGEGSGSSFSDTEGCNEEEAKLARSVTDGELRHRILNPLSHHGRACSFGGFDLTSRS
VHPISDNDDTNKDGDGGVRDAVKSPPTSRISLGKKVKSVRETMRKHISKRYHCSLSEQSS
PDRISSCPHSPQIDSDSLEKPKLKPGGSVESLRSSLSGQSSMSGQTVGTTDSSNSNRESV
KSEDGEEDELPYRGPFCGRALVHTDFTPSPYDTDSLKLKSGDVIDIISKPPMGTWMGMLN
GKVGTFKFIYVDVLNEEEVKPKKTRRRRRARQPKPTSVEELLDRINLKEHLPTFLFNGYE
DLDTFKLLEEEDLDELNIRDPQHRAVLLTAVELLQEYDGSSDPERGSQSGGSQEKLLLDR
RGLMGDSPRDSGCYESNENLENGRNKKTSSSMSRSSSGFESSHLSSPEYPAHPPSLPSSS
PTKTILHSKPRSLPCTLPSPRPPKSSLSLLSSAKGHLRSGAIVKSQSCMELRRNPAPGQL
RRCRSLSDFYKQQRKKLINLKDWNLTPRPRNEEGTKQTVNLQKHFKVTFPSSQSSTTAHD
AMCSTSNVATDNVFTPKQGETRQRTHLKLLSHSTNRKLQSSQKYTSSVKLTARAFNNRNC
WHVHKPHLCRG
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggggccaaatctagtcctcgagtggctgtcacagctccatctggcccagtac
gtggagtcattcattgacaatggctacgacgatctggaagtttgtaaacagatcggagag
ccagaccttgacgccataggtgtacgcattcagtaccacagacacagactgctcacagcg
gtgcagaggctaaaagaggaggatgaaagaaaagcaccgggctactacttcaccttagag
cctctgaatgcctccacttgccgccacacttcacactcaaacagagaggatgacttcagg
acactgggctcacacacacggaccacaggaatacaccaggcctcctgtcctggaaaccat
aacctgagattcacagattgtaatgactttgtgacctatcccaaactgaagctgaaggta
ctaataagggataaacttgctaaagatgggattaacctcggagaggcaccttacacctat
aaggatggctcagtggggaaccttgatgacctggctcaggaatactctcagtattacggc
acctccctcagtgacgtgtgtgaaaggatggaggagctgcggaaacgcaaagtagtgcac
gatgccgagatgggaaagattgactcagtggccacatcagtgcagctccgctctcagatc
caggaatccctcggactcagcagtaccacatccactccagagacagaaagaaggtttcct
gtgcacaaatctagctctgatgatggatcatcaggaggaaaatgggatggaaaaagaaag
agcaagtctttttggcagagtttccgaaaatcacagaaaggagtgatgcgtcagatttca
aaaggtgacgatgttggttttgtggccagtgaaattaccatgagcgatgaggagcgtatc
cagctgatgatgatggtgaaggagaatatgatttctatagaggaagcccttgcacggctg
aaggagtttgagatacaaaacagacagacgtgcaggtctgatctcacagagtggaccgat
ccctccagccccaacacaaatgagtcgttcaactgcaacacaactgaacaggaagaatct
gctacgttcaggagacttcataaactggtcaactcgaccaggaaggtgaagaagaagctg
atcagaattgacgagtccaagaggcctggagcagaggagagccttaacacagatggtctt
ccctgtggagatgccagcacctccctgtactcaggtgtgctgaagaagcatgcagtctgt
cctgtggactccttggcgtcagctctgcaggagcagctcatatacgacagggactctgac
agcctgaccacctccccctcctctagcagtctggacacctgcagcagccagaaaatcttc
caggccttcagcaagtccagcgagagccctgttctccaggagacaaatgtaacaggggag
gtgagggagccaggggaaggcagtggctcttcattttctgatacagagggttgtaacgag
gaggaggccaaactcgctcgatcagtgactgatggagagctccgtcaccgtatcctcaac
ccactcagccaccatgggagagcttgtagttttggaggatttgacttgaccagtcgctca
gtacatccaatctctgacaatgatgacactaacaaagatggagatggaggtgtgagagat
gctgtcaagtctccaccaacatcacgtatttccttgggcaaaaaggtcaagtctgtgaga
gaaacgatgagaaaacacatatccaagagataccactgttctctctctgaacagtcaagc
ccagaccgcatatccagctgccctcactcgcctcagatagattctgactctttggagaaa
cccaaactgaagccaggaggctcagtagaaagtctgaggagttccctcagcggacaaagt
tccatgagtggtcagacagtaggcaccactgactcctccaacagcaacagagagagtgtg
aagtctgaggacggggaagaggatgagctgccttaccgcggacctttctgtgggcgtgct
ctggttcacactgacttcacccccagcccctatgacactgactccctcaaactgaagagc
ggggacgtcattgatatcatcagcaagccaccgatgggcacatggatggggatgctcaac
ggtaaagtcggcaccttcaagttcatttatgtggatgtcctgaatgaagaggaggtgaag
cccaaaaagacgcgcaggaggaggagggcccggcaacccaaacccacctctgtggaggag
ctccttgatcgcatcaacctcaaagagcatcttcccaccttcctgtttaacggctacgag
gatctcgacacattcaagttgctagaggaggaggacctggatgagctgaacattagagat
ccccagcacagagctgtgctgctcacggctgtggagctgctgcaagagtatgatggaagc
agcgacccagagcgaggcagtcagtctggaggctcccaggagaagctgctcctggatagg
cgtggcctcatgggagattccccacgagactcaggctgctacgagagtaacgagaacctg
gagaacggaaggaacaaaaagacttcttcatccatgagcaggtcctcctcaggttttgag
tcaagccacctctcatccccagagtaccctgcccaccctccctccctgccctcctccagc
cctactaagactatactccacagtaaaccaagaagcctgccctgtaccttaccatcaccg
aggccccctaagagcagcttaagtctgctaagctcagcaaaaggtcatcttcgcagtgga
gccattgttaagagccagagctgcatggagctaagaagaaacccagcgccagggcagctg
aggcgctgccgctccctgtcagacttctacaaacagcagaggaagaaactcatcaacctg
aaagactggaatctgactcccagacccaggaatgaggagggcacgaagcaaaccgtaaat
cttcagaaacattttaaggtcacgtttccatcctcccagtcttcaaccacagcacatgat
gccatgtgtagcacttcaaatgtagccacagacaatgtgtttacacctaaacaaggagaa
acacgacagagaacacacctcaagctgctgagccacagcaccaacagaaagctccaatca
tcccagaaatacacctcctctgtcaaactcacagcgagagcctttaataacagaaactgc
tggcatgtacacaaaccacatctctgcagaggataa
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