Lates calcarifer (barramundi perch): 108902012
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Entry
108902012 CDS
T04895
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108902012 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Tubby family proteins
108902012 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108902012
NCBI-ProteinID:
XP_018559226
UniProt:
A0AAJ7QLX3
LinkDB
All DBs
Position
LG19:complement(18740466..18754182)
Genome browser
AA seq
1840 aa
AA seq
DB search
MSRNYEPGHSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDST
ESDTDSDDNILPLVRRVKPLLTVTFLSGDISLMNNYDDLSPAIIRSGLKDVEAQWCSQGD
LLAVAGMERHGLPADAACASIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRL
FLACGPALYVVRVEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIK
PPIPDPNNIRDFVSYPTAGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRRI
SKLRPEFVIMDPKTDSKAEEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNR
MNMESRKSPKLSRANQEGQRSPRLPTKKPPVRSPSLTRREFSMDGITEHNYLAQVTSNIW
GTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVFS
EDEDDLPVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDVL
TNPTATAAAAAAAAAASVPVTDRGQDAVATPYPVPTRYSNPGQVIFNGLEMGPLLPGTLP
PPPPPHHLPPQPHPQRSHSQQPRQQQSKQSQQMQTQQQQQQQKMHHHQQQQQQQQQHHHQ
SQQQQQQQQQQQQHHHQSQQQQQQQLQQQHQQLQQLHHQQTLHQQQQQHQQHQVQQHQQM
QQAQQQVANHQLQHQQQIQQQQQQMQLQHEQMQQQQQQMQQQQQQIRQQIQEMRQQQQQL
QQQHQQIQQQHQQMQRQHQQMQQQLKMQMSLPPPPSGYPTISLQQLHLLPQIPPPSTEPG
LDRGEHGHTLKPSLPRTLPPSFNDTDGSVEIQMRKVNPPPPYPGTVVSAAAAAAAATAAA
TPQTLVTNCDSPSVLAPDPCLKKDDFLLHPVTLQYPTPLGYERITTFDSSGNVEEVCRPR
RRLIRNQNAYTVHGIGGSATLKVTSSDSKKIQLPYSSATLSRLSVPRYSIPSGDPPPYPD
PANQVTATLPPPQRIDSSLIHATLRRDRRDVGLKVPQMMESSRTLPTKAKINSALALTYQ
QRVPTALYTCTQCSSNSSSTSVSVSGGGTTSSGIAGGTVVRQDFPPGKGAHHSTIIVHSK
SASPMASQSSYSLLGAVDNSRDRTVYVNSAFTEDETLNQQCHLEKSVRQLTLGDVSLTVK
RPPPYQWDTSTTEEFWLTPEQTMLAPPPGPHKPPPLIISQAQHLDMTRLPFVLTTKPPAS
PSTSTLTFPSGYQISLSPFPPGVGHSGPQLQTLQNPPPQCSPNEVVASVPFAQQDANLVL
PPGYPPNLANLACCPLPPMYPGASSCAGLQLHPVSLHPWNPYPCPPPMQDPPAPPLPTKT
HQILEKPILSPPPPTAPPPPPPLPPPPPPTELPPSKSATEDLTESANNFPEPSSLNESPV
PQESERFNKKSRKRLDSRAEEANMPTVSEGKSRKEGRALSDFNTLISSPRLGSREKKKPK
GQREQLNKTKKMSRTTNEFQDSSESEPELFISGDELMNQNQSSKKSWKNKRSLRMASELE
EIKCRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDG
RQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcctggtcactcagtagggatgttggctgccgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcatggaaaggccgggtccccaag
agcgagaaggacaaaccggtctgtcggagacggtactatgaggagggctggctcgctacg
gggaacgggagaggagttgttggggtgacgtttacatcaagtcactgcaggagggacaga
agtacacctcaaagaattaattttaacctgcgaggacacaacagcgaggttgtcttggtg
cgttggaatgagccctttcagaagctggccacctgtgatatggagggaggtatttttgtg
tggatccagtacgaaggaagatggtctgtggagttggtgaacgacagaggagcacaggtg
agtgacttcacgtggtcacatgatggcactcaagccctcatcgcctacagggatggcttc
gtgttagtcggctcggttagcggacaaagacactggtcctctgagattaacctggagagt
caaatcacctgtggcatctggacacctgatgatcagcaggtcttgttcggtacagcagac
ggtcaggtgatagtgatggactgtcatggacggatgctcgcccatgttctgctacacgag
tctgatgggatcgtgagcatgtcgtggaactgccccgatttcctggtcgaggacagcaca
gaaagcgacacagactctgatgataatattctgcctttagtgcggagagtgaagcctttg
ttgacagtcaccttcttatcaggagatatcagtttaatgaacaactatgatgacctctct
cctgctataattcgctcagggctgaaagatgttgaggcccagtggtgctcccagggagat
ctgttggctgtggccggcatggagagacacggacttcctgctgacgctgcatgtgcgtcc
atcatgaggaacgcccttgttaagttctataatgtccaaggagagcacatctacactttg
gaaacacctgcacagaggcccatcaccaccatctgttggggtcacagggactctcgtctg
ttccttgcatgtggaccggcactgtacgtggtgcgtgtggagcacagggtggccagcctc
cagctcttatgccagcagggcatcgccagcgccctacgagaggagaaggatgtggggaaa
ctgaacatgccctcgctgctctgctcttatgtcaccactgctttcatccccaccatcaag
cccccaatccctgaccccaacaacatccgtgactttgtcagctatcccacagctgggaat
gagaggctccactgcaccatgaagcgagcagaggacagccctgaagcaggcggaccctgc
tacactctctacctagaatatttaggagggctggtgcctattctcaaaggaaggcgcatc
agcaaactacggcctgagtttgtcattatggatccaaaaacagacagtaaagcagaggag
gtgtgtgtgaatcccatgatctcatacactgacagctgcaactgctctgactccagtgac
attgagttgagcgatgagtgggttgggaagaagtcaccaaagttatcccgaggaaacagg
atgaacatggaatcgagaaaatctcccaaactatcacgcgccaatcaggaaggccagcgg
tcgccgcggttaccaacaaagaagcctccagttcgatctcccagtctgacacgtcgagag
ttttctatggatggaatcacagagcacaattaccttgctcaagtcacatccaacatctgg
gggacaaagttcaaaattgttggacttgcttcgttcctccctgcaaatcttggtgcagtc
atctataagaccagtttacttcatctgcagccgaggcagatgacaatctaccttccagaa
gtgcgaaagatttctcacgacttcatgagcctgcctgtgttcaaccccaatgtgttcagt
gaggacgaggatgacttaccagtgatggggccgtctggagtggcaggagacaatcctccc
tgcacagtcaacattcccattgctcccatccacagcccagctcaggccatgtctccaact
cagagtattggcctggttcagtctcttctggccaatcagaatattcaactcgatgtcctg
accaaccctacagccacagcagcggcagcagctgcagcagcagcagcctcggttcctgtc
accgaccgtggccaggatgcagttgcaacgccgtaccctgtaccaactagatactcgaac
cctggtcaggtgattttcaatgggctggagatgggtcctcttcttcctggcactctaccg
cctcctcctccacctcaccatctcccaccgcagcctcacccgcagaggtctcattcacag
cagcctcgccagcaacagtcaaaacagtcacaacaaatgcagacacagcagcagcagcag
caacagaaaatgcatcatcatcaacagcagcagcagcagcagcagcagcatcatcatcag
tcgcagcagcagcagcaacagcagcagcagcagcagcagcatcatcatcagtcgcagcag
caacagcaacagcaattacagcaacaacatcaacagctacagcaactgcatcaccaacag
acgctacatcaacagcagcaacaacaccaacagcaccaggttcagcagcaccaacaaatg
caacaagctcaacagcaggtggcgaaccatcagcttcagcaccaacagcagatccaacag
cagcagcaacagatgcagctgcagcacgagcagatgcagcaacagcagcagcagatgcaa
caacagcagcagcaaatccggcaacagatccaggagatgaggcagcagcagcagcagctc
cagcagcagcaccaacagatccagcagcaacatcaacagatgcagaggcagcaccagcaa
atgcagcagcagctgaagatgcagatgtcgctgcctcctcctccatccggctatccaacc
atttccttacaacagcttcatcttctgcctcaaattcctcctccttccactgagcctggg
ttagacaggggcgagcatggtcacactctgaagccaagtctgccgcggactttacccccc
tccttcaatgacacagatgggtctgtggagattcagatgaggaaggtaaatcctcctcct
ccatatccaggcactgtagtgtcagcagccgcagctgcagctgcagctacagccgccgct
acgcctcagactcttgtcacaaactgtgacagcccaagtgtcctggcacctgacccctgt
ctgaagaaggatgactttctgcttcaccctgtcaccctacagtacccgacacctctgggg
tacgaaaggatcacaacgtttgacagcagtggcaatgtagaggaggtctgtcggccgcgc
aggcgcctcattcgcaaccaaaatgcgtacaccgtgcatggcatcggaggctcggccaca
ctcaaagtcacctcctctgacagcaaaaaaattcagctgccgtacagctcagcaacattg
agccgtctctccgtccctcgatactcaataccaagtggagaccctcctccttaccctgat
ccggccaatcaagtaactgccacacttccccctccccagagaatcgacagcagtctgatc
catgccactctacgtcgtgaccgcagggacgtggggcttaaagtgccacagatgatggaa
agctcacgaacccttcccaccaaggccaaaataaacagtgcattagctcttacctaccag
cagagggtgcccactgcgttgtacacatgcacacagtgcagcagtaacagcagcagcacc
agtgtcagtgtcagtggaggtgggaccacgagtagtggtattgcaggcggcacggtggtg
aggcaggacttcccaccaggaaaaggtgcacatcacagtacaattattgtgcactccaaa
agtgcctcacccatggcctcccagtcatcttacagtctgttgggtgctgttgataacagc
cgggacagaacagtgtacgttaactctgcttttactgaagatgagactttaaatcagcag
tgtcaccttgaaaaatctgtacgtcagctgactctcggcgatgtcagtctgacagttaaa
cgccctccgccttaccagtgggacacctccactacagaggagttctggctcaccccggag
caaacaatgttggcacctccaccaggacctcataaaccacctccactcatcatcagtcaa
gctcagcacttggacatgacccggcttccttttgttctcacgactaaaccaccagccagt
cccagcacgagcactcttactttcccatcaggttaccagatatcgctctcaccttttcct
ccaggtgtgggtcacagtggaccccagcttcagaccttacagaaccctcctccacaatgc
tctccaaacgaagtggtggcttcagtccctttcgctcagcaggatgccaatttggtcttg
ccaccaggttacccaccgaatctcgctaacctggcttgctgtcctctccctccaatgtat
cctggagccagctcatgtgccggactccagctgcaccccgtcagccttcacccctggaac
ccttacccctgcccgccacccatgcaggaccctccagcacctcccctccctaccaaaact
catcagatcttagagaagccaattctctccccgcctcccccaactgcaccacctccacca
cccccactcccacctccacctccacctactgagctcccgccatccaaaagtgccacggag
gatctaacagagtctgctaacaactttccagagccatcatccctgaatgagagccccgtg
ccgcaggagtctgagcgcttcaacaagaagagccgtaaaagacttgacagccgagcagaa
gaggccaacatgcccaccgtttctgagggcaagtccagaaaggaaggacgagcgctctct
gacttcaacacgctcatttccagcccgaggcttggcagcagagagaagaagaagcccaag
gggcagagagagcaactcaataaaaccaagaagatgagcaggaccacaaatgagttccag
gacagctcagagagtgagccagagctgtttattagtggcgatgagctcatgaaccagaac
cagagcagcaagaagagctggaagaacaagcgcagcctgcgtatggcgagtgagctggag
gagattaaatgccgcaaagcgaatgaaagagaggaccgcagtttaggtagccaggggttt
gtctatgttatggccaacaaacagcctctgtggaatgaagccacacaggtctaccagctg
gactttggagggcgagtcacccaagagtcagcaaagaattttcagatagagctggatggt
agacaggtgatgcagtttgggcgaatagatgggaatgcctatatattggatttccagtat
cctttctcagcagtgcaggcatttgctgttgccttggccaacgtgactcagaggctgaaa
tga
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integrated database retrieval system
