Lates calcarifer (barramundi perch): 108902015
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Entry
108902015 CDS
T04895
Symbol
fbxo30a
Name
(RefSeq) F-box only protein 30a
KO
K10307
F-box protein 30
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108902015 (fbxo30a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108902015 (fbxo30a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
108902015
NCBI-ProteinID:
XP_018559232
UniProt:
A0A4W6EY38
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Position
LG19:complement(18868464..18874502)
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AA seq
738 aa
AA seq
DB search
MENLHPHCLKCINRRCMVRPETGVSCDLIGCPLVCGAVFHSCKLEEHRLLCPYERLPCLN
SGFGCPFTIARIKMAQHLETCPASIVCCTMEWNRWPVSYADRKSYENLSKDFDEVEQLDM
ALALQDQRMLLESLKVTTTVSKNGDKEADESDKMATASSLPETVLSNGTVEMEDEPYTEL
YSTSVKTSRNLAAAFDILTNSKEIEIIVGNLNGEKTNKNGALHNGENGDSHNVYVAEGGK
NVDMQESDSDSECELGAVGGVDCAVGTDGEEDGIGWAEENDFVELFFEEKEDIIEEPIND
SNLVWPEMPQNYMPVVALGPPVPQQAPLSPPMPFLLSDHVRNNFLQHLPTELRYRCLERK
LQNVEVLRGISMFTFNGRRALLSDPYLFRAKMEDKAVDTSDLEVADDPMGLHGIDLITAA
LLFCLGDSPGGRGISDSRFVDGYHIDFGTQTFSFPSAILATNTMVGDIASASACDHASPQ
LSNPSPFHTLRLDLVLECVARYQTKQRSMFTFVCGQLFRRDEFSSHFKNVHGDIHAGLNG
WMEQRCPLAYYGCTYSQRRFCPSVQGFRIIHDRHLGSFGVQPGLPLKNGDNFPRNTRHFG
SKCDQFSSLPFEVLQYVASFLDSFSLCQLSRVSRTMRDVCASLLQMRGMVVLLWEKKRRA
DGSPSWQITDKVWRFSTAFGTVNEWKFANIASMADHLKKCKFNTISRREEAIPLPCMCFT
RELTKEGRCLRSVLKPVA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctgcacccccactgccttaaatgcatcaacagaagatgcatggtaagacca
gaaacgggtgtttcctgtgacctcattggctgtcctcttgtctgtggggcagtttttcac
tcatgtaaactagaggaacatcgcctgctgtgtccgtacgaacgcctgccatgcctaaac
agtgggtttggctgtcccttcactattgcaaggatcaagatggcacagcaccttgagact
tgcccggcaagtatagtatgctgcactatggagtggaaccgctggccagtgagctatgct
gatcgcaagtcctatgaaaacttgagcaaagactttgatgaggtggagcagctagacatg
gctttggcgctgcaggatcagaggatgttgttagaatccctgaaggtcacgaccactgtg
tcaaagaacggagataaagaagcagatgaaagtgacaaaatggccacagcatcaagttta
ccagagacagtgttaagtaatggaacagtggagatggaagatgagccctatactgaattg
tatagcacctcagtgaagacaagcagaaatttagcagcagcctttgacatcctcactaat
tccaaggaaattgagataattgttggaaatctaaatggggaaaagactaataagaatgga
gcactccacaatggagaaaatggtgatagtcataatgtttatgttgctgagggagggaag
aacgtagatatgcaagagagtgactctgattccgagtgtgagctcggagcagtaggtgga
gtagattgtgcagtgggcacagatggagaagaagatggtattggttgggcagaagaaaat
gattttgtagagttgttttttgaagaaaaggaagatattattgaggagccaataaatgat
tccaacctcgtctggccggagatgccacagaattacatgcctgttgtagctctggggcct
cctgtgcctcagcaagcaccactttcacctccaatgccattcctgctgtctgatcatgtg
agaaataacttcctgcaacatttacccactgaactcaggtataggtgcttggaacgtaaa
ctacagaatgtagaagtccttagaggtataagtatgtttacatttaatggacgtcgggct
ctgctgtcagacccgtacttgtttcgagcaaagatggaggacaaggcagtggacacatct
gacctggaggtggctgatgaccccatgggcctccatggcattgatctcatcactgcagct
ttgctcttctgcctcggcgattctccaggaggcagggggatctcagacagcaggtttgtt
gatggctaccacattgactttggtactcagacgttctccttcccttcagctattcttgca
accaacaccatggtgggagacatcgcttcagcctcggcctgtgatcatgccagcccacag
ctgtctaatcccagccccttccacactctcaggctggacctggtgctagaatgtgtggct
cgataccaaaccaaacagcgctccatgttcacttttgtgtgtgggcagttgttccggcgg
gatgagttttcgtctcatttcaaaaacgttcacggggatatccacgctggacttaatggc
tggatggagcaacgctgccccttggcctactacggatgcacatattcccaaagacggttc
tgcccctctgtacagggcttccgaatcatccacgacaggcacctcggctctttcggggtt
cagcctggtctacctttaaaaaatggggacaacttcccaagaaacacccgccactttggc
tctaagtgcgatcaattcagcagtcttccatttgaggtgttgcaatatgtagcaagcttc
ctggacagcttcagcctgtgccaactatccagagtgtcccgcaccatgagggatgtgtgt
gccagtctgctccagatgcgcggcatggtcgtcctgctgtgggagaagaaacggcgtgct
gatgggtctccttcatggcagatcacagacaaggtgtggcgattcagcacagccttcggt
acagtgaatgaatggaagtttgccaatatcgccagcatggcagaccacctcaagaagtgc
aagttcaacacaatttctcgccgggaggaggccatccccctgccgtgcatgtgtttcacc
agagagctcacgaaagagggaaggtgtttacgttcagttctcaaaccagtagcataa
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