Lates calcarifer (barramundi perch): 108902051
Help
Entry
108902051 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108902051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108902051
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108902051
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
108902051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
108902051
NCBI-ProteinID:
XP_050922702
UniProt:
A0AAJ8AZY4
LinkDB
All DBs
Position
LG24:complement(9689511..9740928)
Genome browser
AA seq
1475 aa
AA seq
DB search
MAPVSNPDKDMDVPDGDDGGDTGGLAKSRSRREKREKVGRKSALEQLKKAKRGEKVKYEV
EELTSVYEEVDEEQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENNKGKA
SAKGADSKKTVKKSVVAKPNTIKSLFMNSNVKRPVEKDVDLSKDDLLGDILQDLHSEKLS
PLAPPPVVTLKKKKSLGSPMNPFSIKPQMPKESPSATGLKAKVIRPPPSDLSPRPSARPS
PSTPALPPEKQRVKVEKPDEEEENDAMAFDGVDFDEPMEVGLEEEKPAVTEDAEFESKAS
TVAAVKVEPKAEPRDPILLSSRIGSSWGQEEGGVSEAPAEVQVDSSKLPLVEGADGEQVF
RFYWLDAFEDPYSQPGVVYLFGKVWIESAKSHVSCCVTVKNIERTMYFLPRECKVNPKTG
EVSDTPVGMMDVYQEFSEVSEKFKIMKFKSKKVEKNYAFEIPDVPSQCEYLEVRYSAEFP
ALPSDLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLISQPVSWCKVEALALR
SDLVTVVKDLPPPPITVMSISLKTTQNSKTHHNEIVSLAALVHYQYHMDKAPPQPPYQTH
FCVVSKPADCIFPYDFKEAVRKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGF
DLEVLLQRINMCKVPHWSKIGRLRRANMPKLGGRGAFAEKSATCGRLVCDVEISAKELIR
CKSYHLTELAGQVLKTERVTVPQEEIKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVL
PLALQITNIAGNVMSRTLMGGRSERNEFLLLHAFHDKNYIVPDKPSFKKAQLEMAEGEED
VDAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAHN
AQKKNEEDEPEEIPEIPDSSLEMGILPKEIRKLVERRRQVKQLMKQQDINPDLYLQYDIR
QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDS
IMINTNSKSLEEVYKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALIVENHGD
GQHSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEVGEKVAG
GAIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYIICKDGST
LAASQRAYALEQLQKQEGLSLDTQYYLAQQIHPVVSRICDPIEGIDSVLIATWLGLDPSQ
FRAHQQYQREEEADGMLGGPVQLTDEERYKDCERFTFTCPQCGTDNIYDSAFEGAGSKLE
PSLLRCCHIPCGSHPIDYAVNISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRRLPIAF
SRHGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDYAVNKVLQGDEKKQANCWRTEK
EVYRRLKEVPDKALATSGYSEINLAKLFQAFSSLK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtatcaaacccagacaaagacatggacgtcccggacggcgatgatggaggt
gacaccggcggtctggcgaagtctcgctccagacgcgagaagagggagaaggtgggaagg
aagtctgcactggaacagctcaagaaagccaagaggggggagaaggtcaaatatgaagtg
gaggagttaaccagtgtatatgaggaagtggacgaggagcaatattcgaagatggtacga
gagcgacaggaggatgactggattattgatgatgatggaacagggtatgtggaggacggg
cgtgaaatctttgacgacgatttggatgatgatgttgtagaaaacaacaagggaaaagca
agtgctaaaggagcagactcaaagaaaactgtgaagaaatctgtcgtagccaagcctaac
accattaagagcctcttcatgaacagtaatgtcaagaggcctgttgagaaagatgtggac
ctgtccaaagatgacctattaggagatatcttacaggacctgcactctgagaaattgtct
cctttggctcctccaccagtggtcactctgaagaaaaagaagtctcttggatcacctatg
aatccattctccattaaacctcaaatgccaaaggagtcaccttcagctacggggttaaag
gccaaagtgatccgtccaccaccttctgacctgagccccaggccatcagctcgtccttct
ccctccacacctgctcttcctccggagaagcagagggtaaaagtagagaagccggatgaa
gaggaggagaatgatgcaatggcgtttgatggtgtggattttgatgagccgatggaggtt
ggacttgaggaggagaagcctgcagtcacagaggatgctgagtttgaatctaaagcatca
acagtagctgcagttaaagtggagcccaaagcagagcctcgggatcctattctcttgtcc
agcaggatcggaagctcttggggacaagaggagggcggagtcagtgaggcgccagcagag
gtacaggttgactccagcaaactcccgctagtggagggggctgacggcgagcaggttttc
cgcttctattggttggatgcctttgaagacccgtacagccagccaggtgtggtgtacctg
tttggaaaagtgtggatcgagtctgcaaagtctcatgtcagctgctgtgttactgtcaag
aacattgagcggaccatgtacttcctgcctcgtgaatgtaaagtgaaccccaagactggg
gaggtgtcagacactcctgtggggatgatggatgtttaccaggagttcagtgaggtctct
gagaagttcaagatcatgaagttcaagtccaagaaagtggagaagaactatgcttttgaa
attcctgatgtgcccagtcagtgcgagtacctggaagtcagatattctgcagagttccct
gcactgccttctgaccttaagggggcgaccttctcccacattttcggtaccaacacctcc
agtctggagcacttcctcctcagcaggaagattaaagggccttgttggctggacattaag
acaccacagctgatcagccagccggtgagctggtgcaaggtggaggctctggccctgagg
agtgacctggtcactgtggttaaagacctgccacctccacccatcactgtcatgtccatc
agcctcaagactacccagaactccaagacacaccacaacgagattgtgtcccttgctgca
cttgtccactatcagtaccatatggataaagctccacctcaacctccttaccagacccac
ttctgtgtggtcagtaaaccagctgactgcattttcccgtacgacttcaaagaagctgtg
aggaagaagaatgggaaggtggagatagctgctacagagcggactctgctcggctttttc
ttggccaaaatgcacaagatcgaccctgatgtgctggtgggccatgacatctttggtttt
gacctggaagtgcttctgcagaggattaacatgtgcaaggttccacactggtctaagatt
ggacgcctcaggagggccaatatgcccaaattagggggtcgtggtgccttcgctgagaag
agtgcaacctgtggccgtctggtgtgcgatgtagagatctcagccaaggagctgattcgc
tgtaaaagttatcatctgactgagctggctggacaggtgctgaagacggagagagttaca
gtcccccaggaggaaatcaaaaatctctacagtgactctccacacctgctctacctgttg
gagttgacatggacagacgccaagctgatcctccagatcatgtgtgagctcaacgtgttg
cctctggccctgcagatcaccaacatcgctggcaatgtcatgtctcgtactctgatgggt
ggtcgctctgagaggaatgagttcctgttgcttcatgccttccatgacaaaaattacatt
gtccctgacaaaccctccttcaaaaaggcccagctggagatggccgaaggagaagaagat
gtggacgcaggcaaaggcaaacggaagaagaaggcagcctatgctggaggtctggtgctg
gatcctaaagttggtttctatgataagtttgtgctgctgcttgacttcaacagcctgtat
ccgtcaatcatccaggagttcaacatctgcttcaccactgtacagagggaggctcacaat
gcacagaagaagaatgaggaggatgagccggaggagattcccgagattccagattccagc
ttagaaatgggaatcctgccaaaggaaatcaggaagctggttgagcggcgtagacaagtc
aaacagctgatgaaacagcaagacatcaacccagacctttacctgcagtatgacatccgt
cagaaagctctgaagctgactgctaacagtatgtatggatgcctgggattcagctacagc
cgtttctatgccaagccacttgctgccctggtcacacacaagggtagagagattctgatg
cacacaaaagacatggttcagaagatgaatctggaagtcatctacggagataccgattcc
attatgatcaacaccaacagcaagtctctagaggaagtctacaaacttgggaataaggtg
aaggcagaagtaaacaagctgtacaaactgctggaaatcgacatcgacggtgtgtttaag
tcgctgctgctactgaagaagaagaaatacgcagccttgattgtggagaatcatggcgat
ggacagcacagcgtcaagcaggagctcaaaggcttggacattgttcgcagagattggtgt
gacctggccaaggaatgtggaaactatgtgattggtcagatcttgtcagaccagagtcgt
gatgtcattgtagagaacatccagaaacacctggtggaggtgggagagaaggtagcaggt
ggagccatacctctcaaccagtatgagatacacaaggcgctgaccaaggaccctcaggac
tatccagacaagaagagcctcccacacgtccatgtggccctgtggatcaactctcagggc
ggtcgccgggtcaaagctggagatacaatctcttacatcatctgtaaggatggctctacg
cttgcagccagtcagagagcctatgccttagagcagctccagaagcaggagggtctcagt
ctggacactcagtactacctggcccagcagattcaccctgtggtgtctcgcatctgtgat
cccattgagggcatcgacagtgtgctcatagccacgtggctgggtctggaccccagccag
ttccgtgcccaccagcagtaccagagagaggaggaggctgacggcatgctgggaggcccg
gtccaactgactgatgaagagcgctacaaagactgtgagaggttcactttcacctgccct
cagtgtggcactgacaacatctacgacagcgcctttgaaggagctggttcgaagttggag
cccagcttgttgcgatgttgccacatcccctgtgggagccaccccatcgactatgccgtt
aacatcagcaacaaactgttacttgacatccgtcgccacatcaaaaaatactattctggc
tggttggtgtgtgaggaccaggcctgtcagaacaggaccagacgtttgcccatcgccttc
tcccgccatggacccatctgccctgcctgcaccagggcgactctcagacctgagtactcc
gagaaggccctgtacaaccagctctgcttctacaggttcatctttgactgggattatgct
gttaacaaagtgctacagggtgatgagaaaaaacaagctaactgctggcggactgaaaag
gaagtgtatcggaggctgaaggaagtgccagacaaagccttggctaccagcggctactcg
gagattaacctggccaaactcttccaggccttctcctccctcaagtaa
DBGET
integrated database retrieval system
