Lates calcarifer (barramundi perch): 108902108
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Entry
108902108 CDS
T04895
Name
(RefSeq) TBC1 domain family member 20 isoform X1
KO
K20372
TBC1 domain family member 20
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108902108
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108902108
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
108902108
NCBI-ProteinID:
XP_018559355
UniProt:
A0AAJ7VL53
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Position
LG12:complement(27066295..27073775)
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AA seq
400 aa
AA seq
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MRKSRSASASPSPVNGKHGNDWDSRRKRKIADITQALTVSPVDVAALRRMAISEGGLLTD
EIRCQVWPRLLNVPLQVLDQEPEKVERENNKDYNQVLLDVQRSLRRFPPGMPDEQREGLQ
EELIDIILRVLKRNPQLHYYQGYHDIVVTFLLVLGERLATALVEKLSTHHLRDFMDPTMD
NTKHILNYLMPIIERVNPEVHDFMQQAEVGTVFALSWLITWFGHVLSDFRHVVRLYDFFL
ACHPLMPIYFAAVIVLYREEEVLDCECDMAMVHHLLSQIPQDLPYETLISRAGDLFVQFP
PSELAKEAVSHESMAASTFKDFDLASTQQRPDSVLRRRRRQKQAALESPAAGSVVAVARP
SAARRFVRLAVMGLTVALGAAALAVVNTALEWAPKLDLFP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcaaggagtgctagtgcctcaccttcaccggttaatgggaaacacggtaac
gactgggacagcagacggaagaggaagattgcggacatcacacaggccctgaccgtgagt
ccggtggatgtagcagctctgaggaggatggctatcagtgagggaggactgctgactgat
gagatacgatgtcaagtctggcctcggcttctcaacgtcccccttcaagtcctggatcag
gagccagagaaggtggagcgagagaataacaaggactacaaccaagtcctgctggatgtg
cagcgctcactgaggaggttcccacctggtatgccagacgagcagagggagggtcttcag
gaagagctgattgacatcatcctcagagtcctgaaacgtaacccccagctgcactactac
caaggataccacgacattgttgtcacctttctgttggtcctgggagagcgtcttgcaact
gctcttgtggaaaagctctccacacatcacctcagggacttcatggatcccaccatggac
aacacaaaacatattcttaactatttgatgcccatcattgagagggtcaacccagaggtg
catgacttcatgcaacaggctgaggtgggcaccgtctttgctcttagttggctgatcacc
tggtttggccacgtcctgtcagacttccgccatgttgtccggttgtatgacttcttcttg
gcctgccatccactgatgcccatctactttgctgctgtgatcgtactgtacagagaggag
gaggtgttggactgtgaatgtgacatggccatggttcatcacctgctgtctcagattccc
caggatctgccgtatgagacgctcatcagccgagcaggagacctctttgtccagtttcct
ccgtctgaactggctaaagaagctgtctcacatgagagcatggcagcctctacctttaag
gactttgaccttgcatccactcagcagcgaccggactctgttctccgtcgccgacgcaga
cagaaacaggctgcgctggagagcccagcagccggctctgtagtggcagtggctcggccc
tcagcggcacgccggtttgttcgactggctgtcatgggtctgacggtggcgttgggggca
gcagctctggctgtggtcaacactgctctggagtgggcccccaaactggacctgttccct
tga
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