Lates calcarifer (barramundi perch): 108902178
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Entry
108902178 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108902178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108902178
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108902178
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108902178
NCBI-ProteinID:
XP_018559442
UniProt:
A0AAJ7QLN5
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Position
LG14:complement(4565592..4587075)
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AA seq
494 aa
AA seq
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MKSLDLFLLACCLCSLSTLGGASDMEQALMKKLFATYNLKVRPAASPEERVVVRVGMMLS
SFVGLNMKNEEMSTIVVMNLEWTDHRLSWKPKEHDGIEVLRIPSGKVWLPDIVLINNNDG
VFDVALHVHVQAYSNGRVTWTPPALYCSSCGVKVTYFPFDWQNCTMQFRSYTYDSTEIDL
QYALDSKGNEIREIQMDESYSEGGEWHIRHRPSRKVINDDRYEDMIFYLIIERKPLYYVL
NIIIPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSPNTHQMPMWVRKIFIHMLPPYLGMLRPKVETPLS
LETMPRREKKKVAISKVADEYFIRKPDSSILFPKPNRFQPEGXCTDLRKFIDGPSTYLSL
PDELKSAIDAITYIAEALQAERTMTKLKEDWQYVAMVVDRMFLWIFVIFTTVGTLAIFAD
ASFNHTPTDPFKSP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctggatctgttcctgctggcgtgttgcttatgcagcctgagtacattggga
ggtgccagtgacatggagcaggctctgatgaagaagctcttcgccacctacaaccttaag
gtccggccagcagccagccctgaagagagggtggtggtccgtgtgggtatgatgctctcc
tccttcgttggactgaacatgaagaatgaagaaatgagcacaattgttgtcatgaatctg
gaatggacagatcatcggttgtcatggaaaccgaaggagcatgatgggattgaggtgttg
cgtatcccctctgggaaggtctggctgcctgacattgtcctcatcaataataatgatgga
gtgtttgatgtggccttgcacgtccatgttcaggcttatagtaacggcagagtaacatgg
actccccctgctctatactgcagctcctgtggagttaaggtaacatatttcccttttgac
tggcagaactgcactatgcagttccgctcttacacatatgactcaacagagattgacctg
cagtatgcactggactcaaaaggcaacgagattcgggaaatccaaatggacgaatcttac
agtgagggcggcgagtggcacatcagacacaggccgagcaggaaggtcataaatgacgat
cggtacgaggacatgatcttctacctgatcattgagaggaagcctttgtactacgtcctg
aacatcatcatcccctgcattctcatcaccatcatcgccatctttaacttctatctgcct
cctgatgcaggtgagaagatgggtctgtccatcaacgtgctgctgaccctcactgtgttc
ctgctgctgctggctgataagatccctgagacttcactgggcgtccccatcatcgtcaac
tacatcatgttcaccatgatcctggtcacgttctccgtcatcctcagtgtggtcgtcctt
aacctgcatcaccgctcccctaacacccaccagatgcccatgtgggtccgcaagatcttc
atccacatgcttcctccttacctcggcatgctgcggccaaaagtagagacccccctgtcc
ctggagaccatgccccgccgggagaaaaagaaggttgccatcagcaaagtggctgatgaa
tactttatccgcaaaccagactcctccatcttgttccccaagcccaacaggtttcagcca
gagggcnnatgtacggacctaagaaaatttattgatggcccaagtacctacctgtcgtta
cctgatgagcttaagtcagcgatagacgccatcacgtatatcgcagaggcactgcaggct
gagaggactatgactaaactgaaggaggactggcagtatgtggctatggtggtggaccgc
atgttcctgtggatcttcgtcatcttcaccactgtgggaaccttggccatctttgctgat
gccagcttcaaccacacacccaccgaccccttcaagtccccctga
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