Lates calcarifer (barramundi perch): 108902179
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Entry
108902179 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108902179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108902179
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108902179
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108902179
NCBI-ProteinID:
XP_018559444
UniProt:
A0AAJ7QLU5
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Position
LG14:complement(4531463..4543837)
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AA seq
502 aa
AA seq
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MTVMIGQMKMEHSVRMNTLLIICSSLCLTFTGASETERRLHQKLFENYNMKVRPARYWEE
KVMVRVGMTLSQLVSLNEKNGEMTTNVFMNLAWTDYRLSWKPEEYDNINVLRIPPNKVWR
PDIYLINNNDGQFDVALYVNVLVYSDGTVNWLPPAIYRSSCSIEVAYFPFDWQNCSMIFR
SYTYDASEVDLQYFLDDDGKEIHEIVIDENAFTENGEWAICHKPTRKNVKEDLYEDITFY
LIIERKPLFYIINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADKV
PETSLGIPIIVNYVMFTMILVTFSVILSVVVLNLHHRTPSTHIMPNWVRKAFIHFLPKYI
GMMRPNPEEPPVKEESNDDTPIRVFNGRQPGGEYFFRKINPDLVIPWRGRCESTVQLQRL
PDTDSYCLILPPNLKSAIAAVTYMAEQLKKQDTDDTMTGDWQFIALVVDRLFLWLFVIIT
TLGTLAMFLDASFNYTPDNPFP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgattggacaaatgaagatggagcacagtgttagaatgaacacccttctc
atcatatgcagcagcctttgtctcactttcactggagcctcagaaacagagcggaggctc
catcagaaactatttgagaactacaacatgaaagtcagaccagcacgttactgggaggag
aaggtgatggtgcgagttgggatgaccctctctcagcttgtcagcttgaacgagaagaat
ggtgagatgacaaccaacgtgttcatgaatctggcatggacagactacaggttgtcatgg
aagccagaggaatatgacaacattaatgttttaaggattcctcccaacaaggtgtggcgt
cccgacatctacctcataaacaataatgatggtcagtttgacgtggccttgtatgtcaac
gtcttggtttacagtgacgggacagtcaactggcttcccccagccatctaccgcagctcc
tgctctatagaggtggcttacttcccatttgactggcagaactgcagtatgatttttcgc
tcgtacacgtatgatgcctctgaggtggacctgcagtactttctggatgatgatggcaaa
gagatccatgagattgttatagatgagaatgctttcactgagaatggagaatgggccatc
tgtcacaaacccacaaggaagaatgttaaggaggacctgtatgaggatatcaccttctat
ctcatcatagagaggaagcctcttttctacatcatcaacatcatcgtgccctgcatactc
accagcgtgttggccatatttgtcttctacctgcctcctggagcaggagagaagatgact
ctctccatttctgtcctcatcgctctgactgtcttcatgctgctgttggctgacaaggtc
cctgagacttccctcggcatcccaattattgtcaactatgtcatgttcaccatgatcctg
gtcaccttctctgtcatcctgagcgtggttgtcctcaatctgcaccaccgaacacccagc
acacacatcatgcccaactgggttcgaaaggcattcattcacttcctacccaagtacatc
ggcatgatgaggccaaacccagaagaacctccagttaaggaggagtctaacgatgacacg
cccatccgagtctttaatggacggcagcctggaggagaatacttctttcgcaagatcaac
cctgaccttgtcataccctggagaggcagatgtgagagcacagtgcagcttcagcggctc
ccggacactgacagctactgtctgatcctccctcccaacctgaagtcagccatcgccgct
gtgacatacatggccgagcagctgaagaagcaggacacggatgacacaatgacaggagac
tggcagttcattgctctggtagtggaccgtctcttcctgtggttgtttgtcatcatcacc
accctgggaaccctggccatgttcttggatgccagtttcaactacactcctgataacccc
ttcccatag
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