Lates calcarifer (barramundi perch): 108902191
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Entry
108902191 CDS
T04895
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2 isoform X2
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108902191
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
108902191
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec6
MC3
Motif
Other DBs
NCBI-GeneID:
108902191
NCBI-ProteinID:
XP_018559460
UniProt:
A0A4W6CJ80
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Position
LG19:22192276..22202466
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AA seq
645 aa
AA seq
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MRTRSDSSEPDGTRPNFLPGLTARASGGNWFRGKLPRLFRSPRGQDTVNITSTTDGHHSP
KDEEPQNVILTFEENLGLHKYSEASQLLIQREESLFGEITELDSLARHEEEVNDLAEDYG
ILKRNILQTLLQSLKADANTEALTSAVKAIYQEDKQDGLWRQTDRTRPGWRPNSWRELHD
ATLHNLVNERMDYPSTPSANQEGQSSVEAHIHSMGRQLKDDLLMVVEVVRNCYPPETDIC
NVYARLYHQTFSARLRKVADFGLEDKDCQFLLRWVNEYYPGLLQKPALASEINAEALGKL
LPPELLEPLEEQYLSKQQHELMTYIRRVLEEAKEMWNNGQEPMREDGCYVSPVAYDIIQL
VNGMVTSAKTVLGDLHKAQSITSKLNGLMQSFKTFQDEVMRQNKPNSKAFTKANLGNIEQ
FRDTLTKNGDLFLEDVRKDCLSVLTDMKESAHMYLLSPVHEVLKPQYRKLGTSDWLNKPL
FEKLLVSIQAEIQELQGSKESCHQELMSKFHQEVTVEYVKRLLRGEVKLKDKERQDKAYV
TVKNDAERLHSLFIKMGSKEDWLKEILIKIAEVLKLQELPAIQMQVASLGSAFPDLSEKH
VSALLKLKTNFSRADRKTVKATLTDTLTVAGETSAPPFFSKVQVR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcggacccggtcggactccagcgagccagacggcaccagacccaactttctccccgga
ctcaccgcgagagcgtcgggaggaaactggtttcggggaaaactcccgaggttattcaga
agccccagaggtcaggacactgtcaacatcacctccacgaccgatggacaccactcaccc
aaagatgaggagcctcagaacgtcatcctcacatttgaggaaaaccttggtctacacaag
tacagcgaggccagccagctgctgatacagagagaggagtctttatttggggagataact
gagttagattcacttgcacgtcatgaggaagaagtaaacgacctcgctgaagactacgga
atccttaaacgcaacatcctgcagactctgctgcagagtcttaaagcagatgccaacaca
gaggctctgacgtctgcggtgaaggccatctaccaggaggacaagcaggacgggctgtgg
aggcagacggatcggacgcgcccgggctggaggcccaacagctggagggagctgcacgac
gcaactctccacaacctggtaaatgagcgtatggattacccctcgacaccctctgctaac
caggaagggcagtcgtctgtcgaggcacacatccacagcatgggcaggcagctgaaggac
gacttactgatggtggtggaggtggtgaggaactgctacccaccagagacggacatctgt
aacgtttacgccaggctgtaccaccaaaccttcagcgccagactcaggaaggtcgcagac
tttggtctggaggacaaggactgtcaattcctcctgcgctgggtgaacgagtattatcca
ggactccttcaaaagccggcgctggccagtgagatcaatgctgaagctctgggaaagctg
ctgcctccagagttactggagcctctggaggaacagtacctcagcaaacaacagcatgag
ctgatgacttacatcaggcgtgtcctggaggaagcaaaggaaatgtggaataacggacag
gagccgatgagagaggacggctgctacgtcagtcctgtggcctacgacatcattcagctt
gtcaatggtatggtgacttcagctaaaacagtgttgggagacctgcacaaagcccagagc
ataacgagcaaactgaatggtttaatgcagagcttcaagaccttccaggacgaggtcatg
aggcaaaacaaacccaacagcaaagcgttcaccaaggcgaacctcggcaacatcgaacag
ttcagggacaccctcacgaaaaacggcgatctgttcctggaggatgtgcggaaagactgt
ttgtctgttctgactgacatgaaagaatctgcccacatgtatttattaagccctgtgcac
gaggtcctcaagccacagtaccgcaaactgggaaccagtgactggttgaacaagcctctg
tttgagaagctgctggtcagcattcaggcagagattcaagaacttcagggctcaaaagaa
tcctgtcaccaggagctgatgagcaagtttcatcaggaagtgacagtggaatatgtgaag
aggctcctgagaggagaggtgaagctgaaggacaaggaacgacaggataaggcctacgtg
accgtgaagaacgacgcagagcgtctgcacagcttattcatcaaaatgggttcaaaggag
gattggctgaaggaaatcctgatcaagattgcagaagtgctgaaactccaagagctcccc
gccatacagatgcaagtagcgtcactgggaagcgcttttcctgacctcagtgaaaaacac
gtttcggctctgctcaagctcaagacaaacttctccagagccgacaggaaaacggtcaaa
gcgactctgacagacactttaacagtagccggtgagactagcgctccgccgtttttctcc
aaagttcaggtcagatga
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