KEGG   Lates calcarifer (barramundi perch): 108902287
Entry
108902287         CDS       T04895                                 
Name
(RefSeq) U6 snRNA phosphodiesterase 1 isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108902287
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108902287
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 108902287
NCBI-ProteinID: XP_018559599
UniProt: A0A4W6EEK8
LinkDB
Position
LG10:complement(23280037..23284683)
AA seq 282 aa
MPNDSRMLVGYSSSSSEDSEAASDVEKSCSRKCQEEDDGNDDCPVRKKPKTEEQVTKARL
PLPDCLLAMFPDDEVPQTEDSSLHSGRIRSFKHERGNWATYVYLPYHPEEEFRELLDELL
SAARAHGVVLTPQDEFHLSLSQTVVLRHHWIQPFTQSLRSDLAHCKRFVCSAGKLRVYCN
AERTRTFLGMEVCTGHAQLLDLVQAVDRTMTEFHLDTFYKDPSFHVSLAWCVGDLTVQIE
ECIQVLQCVVDDHEEGPFLLRLDGMELRCRTGNKTFHFPLKP
NT seq 849 nt   +upstreamnt  +downstreamnt
atgcccaacgactcgcggatgttggttggctacagcagcagctcctcggaagacagcgag
gcagcgagtgatgtggagaaaagttgttctcgaaagtgtcaagaggaagatgatggtaac
gatgactgcccagtgaggaagaaacctaaaactgaggaacaggttactaaagcaaggctg
cctctccctgattgcctgctggccatgtttccagatgacgaagtaccacagactgaagac
agctctcttcacagtggccgtatccgctctttcaaacatgagagaggaaactgggccacc
tatgtttatttgccataccatcctgaggaggagttcagggagctgctggatgaactgctc
tccgcagcaagggcccatggtgtcgttttgaccccacaggacgagttccacctcagcctg
tcccagacggtggtgctgagacaccactggatccagccctttacacagagcctcaggtca
gacttggcacactgcaaaaggtttgtgtgctcagcagggaaactaagggtgtattgtaat
gctgagaggacaaggacattcttgggtatggaagtgtgtactgggcatgctcagttgttg
gacctggtccaagctgtggacagaacgatgacagagtttcacctagacactttctacaag
gatccatcttttcatgtgagtctggcctggtgtgttggagacctgacagtgcagattgag
gaatgtattcaggtgctgcagtgtgtggttgatgaccatgaagaaggaccatttcttctg
aggttggatggcatggagctgcgctgcaggactggaaacaaaactttccatttccccctc
aagccctaa

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