Lates calcarifer (barramundi perch): 108902492
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Entry
108902492 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 3
KO
K04911
potassium voltage-gated channel Eag-related subfamily H member 8
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108902492
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
108902492
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PAS_9
cNMP_binding
Ion_trans_2
PAS_3
PAS
PAS_4
DNA_repr_REX1B
NTR2
IFP_35_N
CLZ
ZapB
Motif
Other DBs
NCBI-GeneID:
108902492
NCBI-ProteinID:
XP_018559888
UniProt:
A0AAJ7QMS4
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Position
LG1:3340545..3466780
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AA seq
1215 aa
AA seq
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MPVMRGLLAPQNTFLDTIATRFDGTHSNFVLGNAQVQSLYPIVYCSDGFCELTGYARAEL
MQKSCACHFLYGPETSDRSTAQIQGALDERREFKTELVFYKKEGTQFWCLLDIVPIKNEK
GEVVLFLVSHKDITDKKKDQDPEQGPDTDEETGLEVHQVTRPPGFNANRRRSRAVLYHLS
GHLQKQDKSKLKINNNMFGEKPPIPEYKVAAIQKSRFILLHYGTFKAGWDWLILLATFYV
AVTVPYNVCFTVVGGRDEGSSSAPRSPPSVSDILVEILFILDIVLNFRTTFVSTSGQVVY
DARSICVHYVTTWLFVDLIAALPFDLLYAFNVSVYFGVHLLKTVRLLRLLRLLQKLERYS
QYSAVVLTLLMSMFALLAHWMACVWYFIGRREIESPGSWDIGWLHELAKRLSTPYFLSNL
TTLAPSTVSSLPANSSSSSQWNVSGSEVGGQGSWNSSQYYGNVSGGEAVSGTGNEGGGFG
VLGGGPSMRSSYVTSLYFALSSLTSVGFGNVSANTDSEKIFSICTMLIGALMHAVVFGNV
TAIIQRMYSRRSLYHTRTKDLKDFIRVHRLPKALEQRMLECFQTTWSVNNGIDVSELLKD
FPDELRADIAMHLNKELLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIY
FVCSGSMEVLKDNTVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISLKGLRE
VLRLYPEYAQKFISEIQHDLTYNLREGHGADVDWESNGSLVKKLPSIREDEEGDEEQSSV
SHAPRSPLRLSRGLNSPLRSPLLPPRPFRAPSEHSRPTTLQIPVVSFSSAPPELSPRFVD
GIETETNSTSSQKFEFSPSLSPAAPPSPYPGTQEHSEIKQSVSKLTEEMNCLSKQVSKLS
QELQEMTRLLKPLLQTAPQPILTTMMPNLTPPPSSASQLSTSTCLMVPPSATPCSLQRPN
THSLLDSGDIEGVDLPGCLLPTPHSPKRPNSSPSASPQPPSKSPGGKIKGPVNSDLLSSE
DGCPEESPVPRSLHASSSNGIFLPSLQDQPPLASHTPSPSLSFSMSLSSSPSRSPCQGPH
PSRPGSCASRGLLPPPPSQDTPPPPSSHYSAPPSLTSSPGDHRLRPSPSVPLVSPTVLVH
PSTLSLPLSLDFVSARGRQGDTKTPSWFKSQVHHEEARPVTHPQELEMQEWGWQVEEGKS
STEHISFIDEEEPAL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgatgagagggctgctggccccacaaaacaccttcttagacaccatcgccacc
cgcttcgatggcacccacagcaactttgttctgggaaatgcccaggtgcagtcgctctac
cccatcgtctactgctccgacggtttctgcgagctcaccggttacgctcgcgccgagctc
atgcagaagagctgcgcatgtcacttcctgtatggcccagaaacaagcgaccggtcgacg
gctcagatccaaggagccctagacgagaggagggagttcaagaccgagttggtcttttac
aagaaggaaggtacacagttctggtgtctcttggacattgtacccattaagaatgaaaag
ggtgaggtggttctgttcctcgtgtcccataaagacatcactgacaagaagaaggaccag
gatcctgagcaaggacctgacacagatgaggagacgggtctggaggtgcatcaggtaact
cgccctccaggcttcaacgccaaccggcgccgcagcagagctgtgctctatcacctgtca
ggacatctgcagaagcaagacaagagcaagctcaagatcaacaataacatgttcggggag
aagcctccaatcccggagtacaaagtagcagccattcagaaatctcgcttcatcctcctc
cactatgggaccttcaaggccggctgggactggttgattctgctggcgaccttctacgtg
gccgtcaccgtgccctataatgtgtgtttcacagtggtgggagggcgggatgaaggcagc
agcagcgcccctcgcagcccgcccagtgtcagcgacatccttgtagagatcctgtttatt
ttagacattgtgctgaactttcgaactacttttgtgagcacgtcgggtcaggtcgtgtac
gatgcccgctccatctgcgttcactacgtcaccacctggctctttgttgatctcattgcc
gccctgccctttgacctgctgtatgctttcaacgtcagcgtgtactttggagtccacctg
ttgaagacggtgcggctccttcggttactgcggctgctccaaaagctggagcgctactcc
cagtacagcgctgtggtcctgaccctgctcatgtccatgttcgccctgctggcccactgg
atggcctgtgtctggtatttcataggtcgaagggagatcgaaagtcccggctcctgggat
attggttggctccatgagctggctaagcgtcttagtaccccttacttcctgtccaatctg
acaacgctggccccctccacagtcagcagcctcccggccaacagcagcagcagcagccag
tggaacgtgtcggggtcagaggtcggggggcagggctcctggaattccagccaatattac
ggaaacgtgtcggggggtgaggcggtgtcggggacgggcaatgagggcgggggtttcggg
gtgctgggtggtggcccgtcgatgcgtagcagctacgtgacgtcactctactttgccctg
agcagtctgaccagcgtggggtttggaaatgtgtcagcaaacacggactcagagaagatc
ttctccatctgcaccatgctcataggagcactgatgcatgcagtggtgtttggtaacgtg
acggccatcatccagaggatgtactctcgccgctcactctaccacacccgcaccaaggac
ctgaaggacttcatcagggtccaccgactgcctaaggccttggagcagcgcatgctggag
tgtttccagactacctggtctgtcaacaacgggatagatgtcagtgagctgctgaaggac
ttcccagatgagttacgggctgacatcgccatgcacctgaacaaggagctgctgcagttg
cccctgtttgagtcggccagcaggggctgcctgcgctccctctccctcatcatcaagacc
tccttctgtgctccaggcgagtttctcatccggcagggagacgcactgcaggccatctac
ttcgtctgctcggggtccatggaggtcctgaaagacaacacagtgctggccatactgggt
aaaggagatctgattggctcagactccctaacgaaggagcaggtgatcaagaccaacgcc
aacgtcaaggccctgacctactgtgacctgcagtatatcagcctaaagggtctacgtgag
gtcctccgactctaccccgagtacgcccagaagttcatcagtgagatacaacatgacctc
acgtacaacctgcgagagggccatggggctgatgtggactgggagagtaatggcagcttg
gtgaagaagctgccatcaatccgtgaggatgaggagggtgatgaggagcagagctcggtg
tcccacgccccccgctccccgctgcgtctcagcagggggctcaactcccccctgcgctct
cctctcctgccgcccaggccgttccgcgctccctctgagcactcgcgccccaccaccctg
cagataccggtggtcagcttcagcagcgcaccacctgaactcagccccagatttgtggat
ggcattgagacagagaccaattccacctcatcacagaagtttgagttcagtcccagcctg
tcacctgcagcaccaccctcgccatacccagggacccaggagcactctgagatcaagcag
agtgtgtctaaactgactgaggagatgaactgtctctccaaacaagtctccaagctcagt
caggagctgcaggaaatgacacgcctgctcaagccccttctccaaacagcgccgcagcca
atcctgacgaccatgatgccaaatttaaccccacctcctagcagtgccagccagctgtca
acaagcacctgtctaatggtgccaccctccgccacaccttgttccctccagagaccaaac
actcattccctgttggacagtggagacatagagggtgtggatttgccaggatgccttctc
ccaactcctcattcaccaaaaaggcctaattcatctccttcagcatcgccacagccccca
tccaaatccccagggggcaaaatcaagggacccgtaaactccgaccttctctcgtctgaa
gatggttgtcctgaggaatccccagtcccccgaagcctccacgcttcctccagtaatggc
atttttttgccctcactgcaggaccagcctcccctggcctctcacactccttcaccttct
ctctccttctccatgtctctctcctcctcaccatcccgttccccctgtcaaggcccccac
ccatccaggcctggcagctgtgccagcagaggcctgcttcccccgcctccttcccaggac
acccctcctcccccctcctcccactactcagctcccccatcgctcacatcctcccctgga
gaccatcggctgaggccctccccctccgtccctctcgtatcccccaccgtcttggtccat
ccctccaccctctccctgcccttgtctctggactttgttagtgcaaggggaaggcaggga
gataccaagactccatcttggtttaagtcacaggtacaccacgaggaggccagacctgtc
actcatccccaggagctggagatgcaggagtggggatggcaggtggaggaggggaagtcc
tccacagagcacatcagcttcattgatgaggaggagccagcgttatga
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