Lates calcarifer (barramundi perch): 108902520
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Entry
108902520 CDS
T04895
Symbol
eif4g3a
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 3
KO
K03260
translation initiation factor 4G
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108902520 (eif4g3a)
03012 Translation factors [BR:
lcf03012
]
108902520 (eif4g3a)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108902520 (eif4g3a)
mRNA cycle factors
Stress granule specific factors
108902520 (eif4g3a)
Translation factors [BR:
lcf03012
]
Eukaryotic type
Initiation factors
eIF-4
108902520 (eif4g3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
108902520
NCBI-ProteinID:
XP_050930604
UniProt:
A0AAJ8BEV0
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All DBs
Position
LG12:6079302..6130984
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AA seq
1800 aa
AA seq
DB search
MSLPPKVVPKQAAVAVSGPGSGPSPSSQLRATLTSVSLPPGAPTAPQPGAVPPPQIPRVQ
PSLDDRIFPTQPGVAVYSVPRHAGAPYTAHDITKGHPSLAGTPPGHAHSPALSQVSVPTA
SPYRYPKGWEAGGGSPYNPGQNAGSAPLVYSPQTQPINAQPQSRPFATGPRPTHHQFFQR
TQMQTARPTIPTNTPSIRPGSQTPTAAVYPTNQPIMMTMAPMPFPSPQAAQYYIPQYRHS
TPYVGPPQQYSVQPPGSGTFYPGPGPGEYPAPYPGPPYYPGQYPPSTPIIVPTPQQPPPA
KREKKTIRIRDPNQGGKDITEEIMAGGSGSRNSTPPVGPPSSTPTPPQQQLSSSQTPEQQ
PQQSQSQSQQQQQQQQQQSQSQSQSQPQPQPPQPPQPQQAHPGGYTLEPPQPQQPSQPQQ
PQQPQQPLTTGASDTKPGPDDMPKLEPVAQKSSSPGLVQPEAPVERLKANAPVTEPTSAI
EPGLPFPASLTTPATLPLTAANTSERPSVRESTASASSSYSSTAGEQKPSPAPPQTPNTD
KPLSDAPRTLAASPAPAPKALNGLAESGTELDTAAHEPSLMPPAALQPQASAPAYREASS
SETLPSDVRPEVPIAAALAPMAPVAVVPVTLTSSPAPALPVMLPPGLPPLVQATTEADEP
SKSLDTKDLVPRVGAEAHGGITDSKTEPQHQALIRKSPTTVNQTASAIPKTWRKPNEGIS
AGDAPQKEDEDEPRPADQPAGDQALQSAPLSSSPVPLPSVFTSTPAPAPASSPEADRKPA
APEENGEAEMEPMRNGAGHTSETESSDSGAAPGDKENSTGAPQDMEDLAEPSGKRQYDRD
FLLGFQFMPACIQKPEGLPPISDVVLDKMNQNKLPSRVVDSRVISRGPDFTPAFADFGRQ
MTGGRGAALMNIGARRPPPRKIIMNVSVNDDIQLKKSENAWKPGMKREGLAEDPETQRTQ
ELFRKVRSILNKLTPQKFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPSFSVAYGNM
CRCLATLKVPMTDKPNTTVNFRKLLLNRCQKEFEKDKVDDVVFERKQKELDSAASATERE
RLQEELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRL
LTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADQG
PKTIEQIHKEAKIEEQEEQRKVHQQLLSKDSKRRPDPRDQRDQRVQRDETWNTVPMTKNS
RTIDPTKIPKISKPQMDEKIQLGPRAQVTWVKGSSGGAKASDSELSRTAGLNRYSALQST
PSAQPSTTPPQNPDFDSRRTLGSRSSTGRERSEKPLISAPPSSRPGPFIRGSSSKELLES
QTPEELRRDREREGAEPRRPSVTEDKTEPERSRVREPAKPEPVVQTLDRPALSEEEIERK
SKSIIDEFLHINDYKEAVQCVDELDLGSQLHIFVRVGVESTLERSQITRDHMGQLLFQLV
QQGILPKPQFYKGFADTLEQADDMAIDIPHIWLYLAELLSPVLREGGFSMRELFSELSKP
LLPVGRAGILISEILHILCKQMSHRTVASLWRESGLNWTDFLPEGEDVQTFISQQKLQFV
LSDGSGPEAALSKRILSPEELRRQLERLLLEDMASDEQIFDWVEANLDESQMSSSPFLRA
LMTAVCKAAVKDDNTNCRVDTAIIQRRLPVLLKYLNSDTERQLQALYALQALIVALDQPP
NLLRMFFDCLYDEDVISEDAFYKWETSKDPAEQQGKGVALKSVTAFFTWLREAEEESEDN
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccaccgaaagtggtccccaaacaagccgctgtcgcagttagcggacctgga
agtggcccctctccgtcgagccaactgcgggctaccctgacctccgtgtctctgccgccg
ggagccccaacagctcctcagcccggcgctgtaccgccacctcaaatcccacgggttcag
ccatcactggacgaccgaatcttccccacacagcctggagttgcagtctacagcgtaccc
aggcatgctggcgctccttacactgctcatgacatcacaaagggacaccctagcttggcg
ggcaccccgcccggtcatgcccactccccggcgctctctcaggtatcagtacccacagct
tccccatatcgctaccctaagggctgggaggcaggcggagggtctccatacaaccctgga
caaaatgctggctccgcccctctagtgtactctccccagacacagccaataaatgcacag
ccacagagtcgcccgtttgctacgggccctcgaccaacccaccatcagtttttccagagg
actcagatgcagaccgcaaggcccaccatcccaacaaacacaccctccatacggcctggc
tcacagactcccacggcggcagtctaccccaccaatcagccaatcatgatgaccatggca
cccatgcctttcccttccccacaggctgcacagtactacatcccacagtatcgccacagt
acaccctatgtgggacctcctcagcagtattctgtacagcccccagggtctggcaccttc
tatcctggtccagggccaggggagtaccctgccccatatcctggcccaccctattaccca
ggacagtaccccccctcaacccctatcatagtgcctacaccacagcaacctccaccagcc
aagcgtgagaagaaaacaatccgtatccgtgaccccaatcagggtggcaaggatatcaca
gaggagatcatggcagggggctcagggagcaggaattcaacacctcctgtcggtcccccc
tcctctacccccaccccaccacagcagcagctgagcagcagccagactccagagcagcag
ccgcagcagtcgcagtcgcagtcgcagcagcagcagcagcagcagcagcagcagtcgcag
tcgcagtcgcagtcgcagccgcagcctcagcctcctcagcctcctcagccacagcaggcc
caccctggaggctatacattggagcccccacagccccaacagccctcacagccccaacag
ccacagcagccacagcagccgttgacaacaggggcttcagacaccaaaccagggccagat
gatatgccaaaactggagccagttgcccagaagtcttcctcaccagggcttgtgcagcct
gaagcccccgtggagagactgaaggccaacgcacctgtaactgagcccacttctgctatt
gaaccagggcttcccttccccgcctcgctgaccacccccgccactctgccacttacagcg
gccaacaccagtgaacgtccctcggtcagggagtccactgcttcagcctcttcttcttac
tcgtccacagccggggagcagaaaccctctccggcgccacctcagactcccaacacagac
aagcctctttcagatgccccaagaactctggctgcctcgcctgcaccagcccccaaggcc
ttgaatggccttgcagagtctgggactgagctagacactgcggctcacgagccttctctt
atgccccctgctgcactccagccccaggcctctgctcctgcttacagagaggcctcctcc
tctgaaactttgccttctgacgtgaggccagaggttcccattgctgctgcgctcgcccct
atggcacctgtggctgtggtgccagtcaccctgacctctagccctgccccagctttgcca
gtaatgctcccccccggccttccgcctctagtgcaggccacaacagaggccgacgagccc
agcaaatccttagacactaaagaccttgtccccagagttggggcagaggcacacggtggc
attactgacagcaaaacagagccccagcatcaagcactcatcaggaagagtcccactaca
gtaaatcagacggcttctgctataccaaagacctggaggaaaccaaatgaagggatctct
gctggagacgcacctcaaaaggaggacgaggacgagccgaggccagcggatcaacctgct
ggagaccaggccctgcagtcagctccactgagcagcagccctgtgcccctgccgtcagtc
ttcacctccacccctgctccagcccctgctagcagcccagaggctgacagaaagcctgcc
gccccagaggagaacggcgaggctgagatggagcccatgaggaacggagcaggccacacc
tcagagacggagagcagcgacagtggagccgcccctggagacaaggagaactcaacgggg
gctccacaggacatggaggacttggctgagcccagtgggaagcgtcagtatgacagggac
ttcctgttgggcttccagttcatgcctgcctgcatacagaagcctgaggggctcccaccg
atcagcgatgtggtgctggacaagatgaaccaaaacaagttgccatcccgagtggtggat
tccagggtgatttccagaggacccgatttcacacctgcctttgcagattttggcaggcag
atgaccggaggacgaggcgctgcgcttatgaatattggggcacggcggcctccacccagg
aagatcatcatgaacgtgtcagtgaacgatgatattcagctgaaaaaatcagagaatgcc
tggaagccaggcatgaagagggagggcctcgctgaggatcctgagacacagagaacacag
gagctcttcaggaaggtccgcagcatcctgaacaagctgacgcctcagaagttcaaccag
ctgatgaagcaggtgacagacctgaccatcgacacggaggagaggctcaaaggcgtcatc
gacctggtctttgagaaggccatcgacgagcccagcttctctgtggcctatggaaacatg
tgccgctgcctcgccacgctcaaagtgcccatgacagacaaacccaacaccacagtgaac
tttcgcaagctgctgctaaaccgctgtcagaaggagtttgagaaagacaaggtggacgac
gtggtgtttgagaggaagcagaaggagctggactctgctgcatcggcgacagagcgcgag
cgtcttcaggaagagctggaggaagccaaggacaaggcccggcggcgttccatcggcaac
atcaagttcatcggcgaactcttcaagctcaagatgttaacggaggccatcatgcatgac
tgtgtggtgaagctgctgaagaaccacgacgaggagtctttggagtgtctgtgcagactg
ctcaccaccatcggcaaggaccttgactttgagaaggccaagcctcgaatggatcagtat
ttcaatcagatggaaaaaatcgtcaaggagaggaagacatcatctcggatacggttcatg
ttacaggatgttatagacctgagattgcacaactgggtgtccagaagagccgaccagggc
ccgaaaactatcgagcagatccacaaggaggctaagattgaagagcaggaagagcagaga
aaagtgcaccagcagttgctctccaaggacagcaagagacggccagatccaagagatcag
agagatcagcgtgttcagagggatgagacctggaacactgtgcccatgacaaagaacagc
aggaccattgaccccaccaagatcccaaagatctccaagcctcaaatggatgagaagatc
cagttgggcccacgggctcaagtcacgtgggtgaagggcagcagtggaggagccaaggcc
agcgactcagaactatcacggacagctggcctcaaccgttactctgcgctgcagtccacg
ccatcagctcagccctccaccacacctccacagaacccagactttgactccaggagaact
ctgggaagtcgtagcagtacaggcagagaacgcagcgagaagccgctgatctctgccccg
ccatcatcacggcccggaccattcatcaggggaagcagttcaaaggaactgctggagagt
caaaccccagaggagctgcgaagagaccgggaacgagagggagccgagccccggagaccg
agcgtcacagaggacaagacggagccagaacgcagccgagtcagagagcctgcgaaacct
gagcctgtagtccagaccctggacagacctgccctgtctgaggaggagatcgagaggaag
tccaagtccatcatcgacgagttcctgcacattaacgattacaaggaggctgtccagtgt
gtggatgagctcgatttgggctctcagctgcacatctttgtgcgcgtcggggtggagtca
actctggagcgcagtcagatcacacgggaccacatgggccagctcctcttccagctggtg
cagcagggaatcctgcccaaaccccagttctacaaagggtttgcagacacgctggagcaa
gcggacgacatggccatcgacattccccacatctggctgtacctggccgagctgctcagc
cccgtgctgagggaagggggcttctctatgagagagctctttagtgaattaagcaaacct
ttgcttcctgtgggaagagctgggatcttaatttctgaaatactgcacatactatgcaaa
caaatgagccataggactgtggcttctttgtggagggaatctggcctcaactggactgac
tttctaccagagggagaggatgtccagactttcatctcacaacagaaactccagttcgtt
ctgtcggatggctccggccctgaggcggctctgtccaaaaggatcctgtctcccgaggag
ctgagacgacagctggagagactcctcctggaggacatggccagtgacgagcagatcttt
gactgggtagaggcaaacctagatgaatctcagatgagctcgtctcccttcctgagggct
ttgatgacagctgtgtgtaaggcagcagtgaaagatgataacaccaactgtcgagtggac
acggccatcatccagaggagattgcctgtattactcaagtaccttaactcagacactgag
cgacagctgcaagcactttatgcacttcaggcgctgatcgttgccctcgatcagcctcca
aaccttctccggatgttctttgactgtctgtacgacgaggacgtcatctccgaggatgct
ttctacaagtgggagacaagcaaagaccccgccgagcagcagggtaaaggcgtggccctc
aagtctgtcacagccttcttcacttggctgcgggaggcggaggaggagtcggaggataat
tga
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integrated database retrieval system
