Lates calcarifer (barramundi perch): 108902523
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Entry
108902523 CDS
T04895
Symbol
rbpjb
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region b
KO
K06053
recombining binding protein suppressor of hairless
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108902523 (rbpjb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108902523 (rbpjb)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Other transcription factors
Others
108902523 (rbpjb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
108902523
NCBI-ProteinID:
XP_018559932
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All DBs
Position
LG14:7802938..7848107
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AA seq
490 aa
AA seq
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MAPVVTGKFGERPQPQRLTREAMRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTTLTFTYTPEPGPRPHCSAAGAILRAGNSSLLSSNSQEAGSGVYGPNSTSNAGVTS
SSSTAAAVVS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagttcggggagcgccctcagccacagcgcctaacgaga
gaagcgatgaggaattacctgaaggagcgaggtgaccaaactgtcatgatcctgcacgca
aaagttgcacagaaatcctatggcaatgagaaaaggttcttctgccctcccccctgcgtt
tacctgatgggcagtggctggaagaaaaagaaggagcagatggagcgagacggctgctcc
gagcaggagtcgcagccgtgtgctttcatcggcatcggcaacagcgaccaagaaatgcaa
cagcttaacttagagggaaagaattattgcacagccaaaaccttgtacatatccgactcc
gacaagagaaagcacttcatgttgtctgtcaagatgttctacggtaacagcgctgacatc
ggtgtcttcctcagcaagaggatcaaagtcatctccaagccctccaaaaagaagcagtcc
ctcaaaaacgctgacttgtgcatcgcatcagggacgaaggtggcactgttcaaccggctg
cggtcccaaacggtcagcacacgctatctccacgtggagggcggcaactttcacgccagc
tctcagcagtggggcgccttctacatccacctgttggatgacgaggagtcagaaggagaa
gagttcactgtgagagacggttacatccactacggccagacagtcaagctggtttgctct
gtcaccggcatggctctgcccagactgatcatccgtaaggtggacaagcagacggcgttg
ctggacgcagacgaccccgtctcccagctccacaagtgtgccttctacctgaaggacaca
gaacgcatgtacctgtgcctttcccaagaaaggatcatccagtttcaagccactccatgc
ccaaaggaaccaaacaaggagatgatcaacgacggcgcctcctggacaatcatcagcaca
gacaaggccgaatacactttctacgagggcatgggccctgtccactcgcctgtcaccccc
gtgcctgtggtagagagcttacagctaaacggtggtggagatgtcgccatgttggagctg
acaggacagaacttcactccaaatcttcgggtgtggtttggcgatgttgaggctgagacc
atgtacaggtgtgcggagagcatgctgtgcgtggtgcccgacatctccgccttccgcgag
ggctggcgctgggtgcggcagcccgtccaggtgcctgtcacgctggtgaggaatgacggc
atcatctactccaccacactgaccttcacctacacgccagagcccgggccgcggccacac
tgcagcgccgcgggcgccatcctgcgggccggaaactccagcctgctgagcagcaacagc
caggaggccggctccggcgtctacggccccaacagcacctccaacgcaggagtcacatcc
tcatcctccaccgccgcagctgtggtctcctaa
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