Lates calcarifer (barramundi perch): 108902581
Help
Entry
108902581 CDS
T04895
Symbol
mxra5a
Name
(RefSeq) LOW QUALITY PROTEIN: matrix-remodeling-associated protein 5
KO
K24400
matrix remodeling-associated protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108902581 (mxra5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
LRR_8
LRR_4
BARF1_ig2
Motif
Other DBs
NCBI-GeneID:
108902581
NCBI-ProteinID:
XP_018560020
UniProt:
A0AAJ7QMI5
LinkDB
All DBs
Position
LG7_2:13573592..13586546
Genome browser
AA seq
2500 aa
AA seq
DB search
MILPPVASVSCPRPCSCPQPTELHCTFRSLITIPAAVSKHVERMNLGFNSINEITDKSLT
GLRKLELLMVHGNDINTLPDGVFRDLISLQMLKISYNKLKEINRHTLQGLWSLARLHLDH
NQLEFIHPDAFQGLTSLRLLQLEGNQLQQLHPATFTTFTLLNHFHVSTLRHLYLSDNGLT
SLPSRLVATMPQLENLYLHGNPWSCDCNMRWFHDWNKTSPGVLKCKKDKALPGGQLCPMC
SSPRHLQRKELQAVENLVCSSPVISSPHRTSPPDDTESEVMTTDNFREPFGNISLGLSDE
HGNEVDLKCSIGEPREITKIDWEQVNQLQLSSNITLSVDFECPVDREKYEQLWRLIAYYS
NVPAHLQRGTMLSKEPHPTYVYRQDSEKDALYYTGVKVNVMAQPAWLMQTSADLQLNRLQ
SSAKMVKLILSTELSETVEAELVRRQSRTWVLIETTNTTHKVLSTILGSPSQMYCNVHSS
GQPIIQWMLPDGSKVEAPYSSPDNRVSVSSDGRLVIKSVSHTDTGIYYCIAKVHGDLAVL
PFYLTVQESSSPPPGQDTSITPIEGFAGSPISLPCTASGSPDAEINWILPNNNIVSFQGK
SSRVLVYPNGTLHIPQTQLLDSGYYKCIAMNQHGVDTLAAKITVIRRKGFIRPLRKFPAR
PQSASGVNTQIKVLTEDTEEASGDIEVTQEGSPMNRQDPMRRRIPGSVAPGRRGIHPSRN
MWRRPPVLRKPTGSHVEDSRRRINVSKSKIDPEKWADILAKIRDRTAQNTVTPLPVERTT
ERKLTEQTTQSQETIEGSSDGVTVQEKEGQDYLTTPHTPVLHTQMKTNKHNTQGQGTHVT
SNRYNIHNTHDITSNGQHTHSIHTTTEPHTMQTIYNVQHTTHDTNLDLYTTSNSVLLFPQ
TTSVPLHVVTLWQVNTNSESSSSTFSLQENYSTNTDANGVKTADWSKATERNRNTDSLNV
VASSNTDRELSLSGSQIIPSVNPNESKTSQEENGKYLSETATTSQLHTQPKDTTLDDLRS
QAMLTTASPTTTFLPNTTTNGPEGQLPPRLRQPNSRRRNGTRRKRPNRRKQKLNESPKFI
ATTPANTPLATVRTTASTQLKIEPLEVTTAKFNTTVPFTSSQAASSGSLSHRESTVSRHD
IEAATKPSSLPASPPKTKDNLLTLAKPLFKSTSAAPSFPTASPGVGHGKTSSQTTLRISE
NSSPPERLDILTSTTQERFMSSSVRPLETHRVTVALDLGSLTRSNNPSGSFQTATVQTDI
KNNQSDYQYTPTNKGRKIETGTVPFPFASAASLIEHEIKTTSGYTSSGLITTQSLLFDLE
KEQVTKKPTLLEKYYHSSHQNNSRSSESEVDQHLKEIANIGDTGDAPNTSITTTPPPPAT
SSRPDPVIPSKEVLDVTLPRMSSTVKMGPLLEATTQEASRITVNHSEDQQFTPIITTSEP
RRISDYHPATQSPDHKLTSPALKLTRGQTIKQTATPAPTITAIQTNPFRERLLTSTQDVL
RMHQLPGRVSVPRGKPRITKSNFQTFTVKVETDAQLPCEAKGEPKPFLSWTKVISGASIA
QNTRVQRFEVHPNGTLIIRNTQLMDGGQYLCMVQNQYGTDKMVVNLVVISQHPRVLQPQN
RDITVYLGGKVDLNCEVEGHPRPKVTWVLPNHVHMAAAQLDVPLQQRVVVLSNGTLQISQ
ASYTDRGIYKCIGSSAAGADTVLVHLHVLALPPVIQQTQHENTTLPEGSTAYIHCTATGT
PQPVISWITPDGVQLTASQFSTGRNLIVFPNGTLYIRRLGPGNAGRYECSASNAVKSSRR
TVILSIKKNLSSSKASITSSSPHRTDVIYGSKLLLNCMATGEPDPWIIWRTPSKKLVDAQ
YSFDPRIKVFPNGTITIHSVTDKDSGDYLCVARNKMGDDYVLLRVNVLTRPAKIEQKQQR
SSQEVMYGGDLKVDCVASGLPNPEISWALPDGTMVNPVKQREHNSGGRSRRYLVFDNGTL
YFNDVGMPEEGDYTCYAENQLGKDEMKVRVKVKVATSPPQIQDKDQKIVRVFYGETVTLK
CNSKGEPMPINTWISPTNRVISPALDKYQVLGDGTLVVQKVQRFDGGNYTCLARNSVGQD
HKVIRLEVLVTPPMINGQRESASAVKVTAVQDQRKLVDCVAKGTPTPRVMWVLPGNVILP
APYYSKRLTVHQNGTLEIRSPKKGDSGHLACIARNEGGEVRQVVDLDVKEVVERPQIRGP
KTDTLSLTVGNAMALNCSFEGSILPHVTWILPNGTPLLSGARFSKFFHQPDGTLIISNPS
VGEAGIYRCLGRNSGGFVERTITLSPGRKPEINNRYSSPLNVMNGETLLLHCQTNGEPFR
LTWTLPSGVVLNRPQRAGRYSILPNGTLAIQQVSVYDRGSYVCRAANEYGSSLLSVSVIV
TAYPPRITNGPPSVTYAKRGVAVQLNCIATGIPRVEVAWETPDKTRLAVSTQPRLFGNKY
LHPQGSLIIQNPTHKDAGIYRCTARNAIGIDSKATFLNVF
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgccccctgttgcttccgtgtcctgcccgcggccctgctcctgtccccagccc
actgagctccattgcaccttccgctccctcatcaccatcccagctgctgtatctaaacac
gtggaacgcatgaacctggggttcaacagtattaatgagatcacagacaaatcactgact
ggtctgaggaagttggagcttctgatggttcatgggaatgacatcaacactttacctgat
ggagtgttcagggacctcatatcactacagatgttgaagattagctacaacaagctgaag
gagatcaacagacacactcttcagggtctttggtctttagccaggttacacctggaccat
aatcaactggagttcatccacccagatgcgttccagggtctcacctccctgcgactgctg
cagctggaaggcaaccaacttcagcagctgcacccagcaacattcaccaccttcactctc
ttgaaccacttccacgtctccaccctgagacacctctacctgtcagacaatggattgaca
tcactgccctccaggctggtggcaaccatgcctcagctggagaatctgtacctccatggg
aacccgtggtcttgtgactgcaatatgaggtggttccacgactggaacaaaacctcacca
ggtgttttgaaatgtaaaaaggacaaagcccttcctggtggccagttgtgtcctatgtgt
tcctctcccaggcatctccagaggaaagagctccaagctgtggagaacctggtctgcagc
agcccagtcatcagttctcctcataggacttctccacctgatgacactgaaagtgaggtc
atgactacagacaacttcagggaaccatttggaaatatctccctgggcctgtctgatgaa
catgggaacgaggtggatctgaagtgtagtattggtgagccaagagagattaccaagatc
gactgggagcaggtcaaccagctccagctatcctccaatatcactttatcagtggatttc
gaatgtcctgttgatagagaaaagtatgaacaactatggaggctaattgcttactacagc
aatgtgccagcccacttacagagggggactatgctcagcaaagagcctcatccaacctat
gtgtatagacaggactcagagaaggatgccctctactacacaggtgttaaagttaacgtt
atggcccagccggcatggctgatgcagacatctgcagaccttcagctaaacagacttcag
tcatcagccaagatggtaaaattgatcctaagcacggagctttcagagacagtggaggca
gagctggtgcggaggcagagtaggacatgggtcttgatcgaaacgacaaacacgactcat
aaagtgttgagtactatcctgggaagcccaagtcaaatgtactgtaacgtgcacagttct
ggccaaccaataattcagtggatgctgccagacggctccaaagtggaggcaccatacagc
agtccagacaacagagtgtctgtgtccagcgatggaaggctggtcattaaatcagtcagc
cacacagacacaggaatttactactgcattgccaaggttcatggagatctagctgtcctg
ccattctatctgacagtgcaggaatcctccagtcctcccccaggacaggatacctcaatt
acacccattgagggatttgcagggagccccatttccctgccttgtacagcatctggttcc
cctgatgctgaaattaactggattctaccaaacaacaacatagttagcttccaaggcaaa
tcctccagagttttggtctatcccaatgggactctgcatatcccacagactcagttatta
gacagtggttattacaagtgcattgccatgaatcaacatggtgtagatacactggctgca
aaaatcactgtaatcaggcgtaaaggcttcataagacctttgaggaaatttccagcaaga
cctcagtccgcctcaggggtaaacactcagataaaagttctcacagaggatacagaggag
gcatcaggggacattgaggtaactcaggaggggtctccaatgaaccgccaagatcctatg
agaagaagaattcctggaagtgtggccccaggaaggaggggcatccatccatcaagaaat
atgtggcggaggccaccagtgcttcgaaaaccaacaggatcacatgttgaagacagcagg
aggaggattaatgtgtcaaagagtaaaatagatccagagaaatgggctgatattttggca
aagattagagatagaactgctcagaatactgttacaccactcccagttgaacgtacaaca
gagagaaaactgacagagcagacaacacagtctcaagaaactattgaaggatcatcagat
ggcgtgactgtgcaggaaaaggagggccaggattacctcacaacaccacacactccagtg
ctacatacacaaatgaaaactaataaacacaatacacaaggtcagggaactcatgtgaca
tctaatcgctacaacatacacaacacacatgatataacatcaaatggtcagcacacacac
agcatacacactacaacagagccacacacaatgcagactatatacaatgtgcagcacaca
acccatgatacaaacttggatctatacacaacttcaaacagtgtacttctcttcccccag
accacatctgttcctctacatgttgtcactctctggcaggtgaatacaaacagtgaaagc
agcagcagtacattttctctacaagagaactatagcacaaatacagatgctaatggagtc
aaaacagctgattggtccaaggcaacagagagaaacaggaatacagatagcctgaatgtt
gttgccagctctaatactgacagagagctttctttgagtggaagtcagattatcccttca
gtaaacccaaatgaatcaaagacaagccaagaagaaaatggaaaatatcttagtgagact
gcaacaacatcacagctgcatactcagccaaaggacacaacacttgatgatttgcggtct
caagcaatgctcacaacagcatccccaacaactacatttttgcccaacactacaacaaat
gggcctgaaggacaactgcccccgcgcctccgacagcccaactccaggcgaaggaatgga
actcgaaggaagagaccaaacagaaggaaacaaaagctgaatgaatcccccaagtttatt
gccaccacacctgcaaatactcccctagcaacagtaaggaccactgcctccacacagcta
aaaatagaaccattagaagttacaacagccaaattcaataccactgttccattcaccagc
agccaagcagcgtcatcaggcagtctgagtcacagagaaagcacagtctccaggcatgac
attgaggcagccaccaaaccctcttcactaccagcttctccccctaaaactaaggacaac
cttctaaccctggccaagccactattcaaaagcacatcagcagcaccatcatttccaaca
gcctctccaggagtgggtcatggaaagactagttctcaaacaaccctaagaatctcagag
aattcatctcctccagagcgcttggatatcctcacatcaaccactcaagagaggtttatg
agcagctctgttagacctttagagacacatagggtaactgttgctttagacctcggatct
ttgacacgctctaacaatccctctgggagttttcagactgcaacagtgcaaacagatatc
aagaacaatcaatcagactatcaatacacacccaccaataagggtagaaagattgagact
gggacggtcccattcccatttgcctcagccgcttcccttattgagcatgaaatcaagaca
acttctggatacacttcaagtggcttaattacgacacagagtttgctttttgatttggag
aaagaacaggttacaaagaaacctacactgcttgaaaaatattatcatagttctcatcaa
aacaacagccggagcagtgagtcagaggtagatcagcatcttaaagaaattgcaaacatt
ggagatactggtgatgctcctaacacaagtatcaccacaacaccacctccccctgctact
tcatcaagacctgatcctgtgatcccatccaaagaggtgttagatgtcacgttacccaga
atgtcttccacagttaaaatgggacctttgctggaggccactacccaggaggcatccagg
atcacagtcaaccacagtgaagaccaacaattcacacctatcatcaccacatcagagcct
aggagaatatcagactaccatcctgcaacccagtcacctgaccacaaactgacttcccca
gccttaaaactgacccgtgggcagacaatcaagcagacggccactcctgccccgacaatt
actgcaatccaaactaatccattcagagagagactgctaacaagtactcaggatgtgctc
agaatgcaccagctacctggacgagtatctgttccacgagggaagccaaggataactaag
agcaatttccaaactttcactgtgaaagttgaaacagatgctcagcttccctgtgaggct
aagggcgagccaaagcccttcctgtcatggactaaagttattagtggggcaagtattgct
cagaacacaagggttcagaggtttgaagtccatccaaatggcacattaatcatcaggaac
acacagctcatggatgggggccagtacctttgtatggtccagaaccagtatggaacagac
aaaatggtggtcaaccttgtggtcatatctcagcatccacgggtactccagcctcagaac
agagacatcacagtgtatctgggtggcaaagtggatttgaactgtgaagtggaggggcac
cctaggcctaaagttacttgggtgctccctaaccatgtccatatggctgctgcccaactc
gatgtgccccttcagcagcgtgtggttgtcttgagtaatggaaccctccagattagccag
gccagttacacagacagagggatttataagtgcattggcagcagtgcagctggagctgac
actgtcttagtccaccttcatgtcttagcattgccacctgtgattcaacagacacaacat
gaaaacaccaccctcccagagggaagcaccgcctacattcactgcaccgccacaggcacc
cctcagcctgttatcagctggatcacacctgatggtgtacagctcactgcttcccagttt
tccacaggacgcaaccttattgtctttcccaatggtacactctacatacggagactgggt
ccgggaaatgctgggagatatgagtgctcagccagtaatgcagtgaaatccagcaggaga
actgtgatcttgagcataaagaagaatctgtcctcttctaaggccagcatcacctcatca
tcgccccacagaacagatgtgatctatgggagtaaattgctactcaactgtatggcaaca
ggagagccagatccatggatcatctggaggacaccctctaagaagctggtggatgctcag
tatagttttgatcccaggatcaaggtcttccccaatggcacaataaccatccattctgtg
actgacaaggacagcggtgactacctgtgtgtggcacgtaacaagatgggtgatgactat
gttctgctgcgggtcaacgtgctgactaggccagccaaaattgaacagaagcagcaacga
tccagtcaggaggtgatgtatggtggggacttgaaggtggactgtgttgcctctgggctt
cccaaccctgaaatcagctgggcactgccagatggcaccatggtcaacccggtcaaacag
agagagcataacagtggaggacgtagtcgcaggtatctggtgtttgacaatgggacactg
tatttcaatgatgtcggcatgccagaagaaggtgactacacctgctacgctgagaaccaa
cttggcaaagatgagatgaaggtcagagtcaaggtcaaggttgcaacttccccaccacaa
atccaggataaagatcaaaagatcgtcagggttttctacggtgagaccgttacactcaaa
tgtaactcgaaaggggaaccaatgccaatcaacacatggatatcccctacaaatagagtg
atctcccctgcattagacaaataccaagtcctgggtgatgggacattggtggttcaaaaa
gtccaacgttttgatggaggtaattacacctgcttggccaggaacagtgtaggacaggac
cataaagtcattaggctggaggtcctggtaacacctccgatgatcaacggtcagagagaa
tctgccagtgctgtcaaggtaacagcagtccaggatcagcggaaactagttgactgtgtg
gcaaagggaactcccacccctcgtgtcatgtgggttctaccaggaaatgtgatcctccct
gcaccatactacagcaagagactgacagttcaccagaatggtaccttggaaatcaggtca
cccaagaaaggagactctgggcatctggcttgtattgctcgaaatgaaggaggggaggtc
aggcaggtggttgatttggatgtgaaagaagttgttgagaggccacaaattagaggtccc
aaaacagataccctatcactgactgtggggaatgccatggctttgaattgctcctttgag
ggctcaatactacctcacgtcacttggatcttaccaaacggcacacctctgcttagcggt
gctcgattctctaagtttttccatcaacctgacggtacgttgatcatcagtaacccatct
gttggtgaagctggtatataccgctgtttggggcgtaattctggagggtttgtggaacgt
acaatcactttgtccccagggagaaagccagaaatcaacaacagatacagctctcctctg
aacgtcatgaatggggaaacacttttgcttcattgtcaaaccaatggcgaacccttcaga
ttaacttggacgctacccagtggggttgtccttaacaggccacagagagctggacgatat
tctatactgcccaatgggacacttgcaatccagcaagtatcagtctatgatcgggggtcc
tacgtatgccgagctgcaaatgagtatggtagctctctgctttctgtgtcggtaattgtg
actgcatacccacctcggattaccaacggccctccctctgtgacttatgctaaacgagga
gttgctgttcagctgaactgcatagcaactgggattcctagagtggaggtagcatgggaa
acacctgataaaacccgcttggctgtcagcacccagccacgcctttttggaaacaagtac
ctccatccacaaggttccctcatcatccagaacccaacacataaagatgctggcatctac
cggtgtacagccaggaatgccattggcatagactctaaagctacatttctcaatgtcttc
tga
DBGET
integrated database retrieval system
