Lates calcarifer (barramundi perch): 108902635 Help Entry 108902635         CDS       T04895                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf03040   Spliceosome Brite KEGG Orthology (KO) [BR:lcf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108902635  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcf03019]     108902635    03041 Spliceosome [BR:lcf03041]     108902635 Messenger RNA biogenesis [BR:lcf03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      108902635 Spliceosome [BR:lcf03041]  Complex B   Other components    Prp19-related factors     108902635  Complex C     108902635 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_12 TPR_2 TPR_8 TPR_15 TPR_16 ARM_TT21_C ARM_TT21 TPR_MalT NRDE-2 SNAP Tcf25 TPR_1 Motif Other DBs NCBI-GeneID:  108902635 NCBI-ProteinID:  XP_018560087 UniProt:  A0AAJ7VLJ4 LinkDB All DBs Position LG11:complement(7944613..7951343) Genome browser AA seq 849 aa AA seqDB search MPSLNGKPDVVFEDDDLPYEEEIIRNPYSVKCWMRYIEFKQNAPKSTLNMIYERALKELP GSYKLWYSYLRERRKQVKGKCITEPAYEEVNNCHERALVFMHKMPRIWLDYCQFLVTQCK ITRSRRTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYID YLRSVGRLDEAAVRLATVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES MIAAKMETTAEMGQDEDDDIDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK LYEGNPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN YKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE YGLARHAMAVYERATQAVETEERHLMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR DMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMLKATTSSTGTVSDLAPGQMGIDDMKMLEQKAQQLAAEAEQ DKPKPKEKILFVRSDTSRSELAELSKQANPDEIDIDDDDEDEDEDQGPDEVQLEQKSVPT AVFGGLKDD NT seq 2550 nt NT seq  +upstreamnt  +downstreamnt atgccttcattaaatggaaaacccgatgttgtgtttgaggacgatgatctgccgtatgaa gaggagattatcaggaacccatactcagtcaagtgttggatgcgttacatcgaattcaaa cagaatgcacccaaatccaccctcaacatgatctatgaacgggctcttaaggagctgcct ggcagctataagctgtggtacagttatctgagggaaagacggaaacaagtcaaagggaaa tgtatcactgaaccagcctatgaagaagtcaataattgccatgaaagggcactggtgttc atgcacaagatgcctagaatatggcttgattactgccagttccttgtgacccaatgcaag atcacaagaagtcggcgaacatttgaccgtgcactcagggctcttcctgttactcagcac ccacgcatctggcctctgtacctccgctttgtccgtaacctgcccctgcctgagacagct atcagggtgtatcgcaggtaccttaagctttctccagagaatgcagaggaatacatagac tacttacggtctgttggccgcttggatgaagcagctgtgcgcctagcaactgttgtcaat gacgaaagctttgtgtccaaagagggcaagtctaactatcaactgtggcatgagctatgt gacctgatctcccagaatcctgataaggtgacctctctgaatgttggagccatcatccga ggaggcctcactcgcttcacagaccaacttggaaaactttggtgctctttggctgactat tacatcaggagtggccactttgaaaaagcccgtgatgtgtatgaggaggccatcctcaca gtggtaacagtaagggatttcacacaagtgtttgatagttatgcccagtttgaggagagc atgattgctgccaagatggagactactgctgagatggggcaggatgaagatgatgacata gatctggagcttagattggctcgcttcgagcagttgatagcccggcgtcccctcctcttg aacagtgtactactgaggcagaatccccataatgtccatgagtggcacaagcgggtgaaa ttgtatgagggaaatccacggcagattatcaacacatataccgaagcagtacagactgtg gatccaatgaaggccacagggaaacctcactctctctgggtttcctttgctaaattctat gaggaaaacgagcagctggatgatgccaggacaatctttgagaaggctaccaaggtgaac tacaagcaggtggatgatctcgctgcagtgtggtgtgaatatggagagatggagctgcgc cacgaaaactatgaacaggcactgcgcatactgaggaaagctacagccatcccatccaag aaagcagagtactttgatgcatctgaaccagtccagaacagagtgtacaaatccttgaaa gtctggtctatgttggcagatttggaggagagtcttggcaccttccagtctacaaaagca gtgtatgaccgtattattgacctccgcatcgcaacgccacagatcatcatcaattatgcc atgttccttgaagagcacaactactttgaggaaagcttcaaagcatacgagcgtggtata gctctcttcaggtggccaaatgtttatgacatctggaacacttacctcaccaagttcatt gatcgttatgggggaaagaagctggagagggctagagatttgtttgaacaagccctggat ggctgccctgccaagttcgccaagaccatttacttgttgtatgccaaattggaggaggag tatggattggcacgacacgccatggctgtctatgaaagagcaacacaggcagtggaaact gaagagagacatctcatgttcaatatctacatcaagagagcagctgaaatttatggagtt acctataccagagcaatttaccagaaagctatagaggtccttcctgatgagcatgcaagg gacatgtgtctgcgatttgctgacatggagagtaaactgggtgagattgatcgggccaga gcaatctactcctactgctcccagatctgtgacccaagggttacagctaatttctggcag acttggaaagaatttgagatccgccatggaaacgaggacaccatcagagaaatgctgagg atcaaacgcagtgtccaggccacatacaacacccaggtcaactttatgtcctctcagatg ctgaaggccacaacaagctccacaggcactgtatcagatcttgctccaggccaaatggga attgatgacatgaagatgctggagcagaaggcacagcagcttgctgcagaagcagagcag gacaagccaaagcccaaagagaagatcctctttgtcaggagtgacacctctcgcagtgag ctggctgagctttccaaacaagccaatcctgatgagatcgacattgatgatgatgatgag gatgaagatgaagaccaaggaccagatgaggtgcagcttgagcagaagagtgtccccaca gctgtctttggggggctcaaagatgactga

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