Lates calcarifer (barramundi perch): 108902657
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Entry
108902657 CDS
T04895
Symbol
myod1
Name
(RefSeq) myoblast determination protein 1 homolog
KO
K09064
myogenic factor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108902657 (myod1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Myogenic transcription factors
108902657 (myod1)
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GFIT
Motif
Pfam:
Basic
Myf5
HLH
Motif
Other DBs
NCBI-GeneID:
108902657
NCBI-ProteinID:
XP_018560117
UniProt:
A0A4W6DMX4
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Position
LG10:complement(1474831..1478837)
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AA seq
297 aa
AA seq
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MELSDISFPIPAADDFYDDPCFNTSDMHFFEDLDPRLVHVGLLKPDDSSSSSSSSPSSSS
SSPSSLLHLHHHHAEVEDDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRER
RRLSKVNDAFETLKRCTTANPNQRLPKVEILRNAISYIESLQALLRGGQEDGFYPVLEHY
SGDSDASSPRSNCSDGMTDFNGPTCQSTRRGSYDSSSYFSQTSNGGLKSDRSSVVSSLDC
LSSIVERISTDNSSLLPAADGPGSPPTDPAGETAAPGPAQVPSPTASQDPNLIYQVL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcggatatctctttccccatccccgcggctgatgatttctacgatgacccc
tgcttcaacaccagcgacatgcacttcttcgaggacctggacccgcggctggtccatgtg
ggcctgctgaagccggacgactcctcctcttcgtcctcgtcctccccttcctcctcctcc
tcctccccgtcctccctcctgcacctccaccaccaccacgccgaggtggaggacgacgag
cacgtccgcgcccccagcgggcaccaccaggcgggccgctgcctgctctgggcctgcaag
gcctgcaagaggaagaccaccaacgcggaccggcggaaggcggccacgctgcgggagcgg
aggcggctcagcaaggtcaacgacgccttcgagaccctgaagcggtgcacgacggccaac
cccaaccagcggctgcccaaggtggagatcctgcgcaacgccatcagctacatcgagtcc
ctgcaggcgctgctgcgcggcgggcaggaggacggcttctacccggtgctggagcactac
agcggggactcggacgcctccagcccccgctccaactgctccgacggcatgacggatttt
aacgggccgacctgtcagtcaaccagaagaggaagttacgacagcagctcttatttctct
cagacttcaaacggtggtctgaagagcgaccggagctcggtggtctccagtctggactgt
ctctccagcatcgtggagcggatctcaactgacaacagcagcctgctgccggccgctgat
ggccccgggtccccacccacggaccctgctggtgagacggcagcccccggacccgcccag
gtcccgtctccaaccgccagccaggacccgaacctgatctaccaagtcctatag
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