Lates calcarifer (barramundi perch): 108902690
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Entry
108902690 CDS
T04895
Symbol
cldnk
Name
(RefSeq) claudin k
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecules
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108902690 (cldnk)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108902690 (cldnk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108902690 (cldnk)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108902690 (cldnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108902690 (cldnk)
04147 Exosome [BR:
lcf04147
]
108902690 (cldnk)
04515 Cell adhesion molecules [BR:
lcf04515
]
108902690 (cldnk)
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108902690 (cldnk)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108902690 (cldnk)
Exosomal proteins of colorectal cancer cells
108902690 (cldnk)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
L1 family
108902690 (cldnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
108902690
NCBI-ProteinID:
XP_018560165
UniProt:
A0A4W6FZV4
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All DBs
Position
LG11:complement(8645010..8645934)
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AA seq
215 aa
AA seq
DB search
MATTGMQLLGLILSIVGWVGGALVCAIPLWRVTAFIGNNIVTAQIIWEGLWMNCIVQSTG
QIQCKVYDSLLALPSDMQAARGLTVFSILLCGLALALGVLGVKCTKCIGVNSLKARIARI
SGALFAIAGFLYLVPVCWTAHSIIRDFYDPHVAAPHKRELGPALYIGWGASALLLIGGSL
LYAGSSPPGIPGSPTFSSGESSPRRAPATQVKGYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacgggcatgcagttgctgggcctaatcctgtccattgtgggctgggtgggt
ggggcattagtctgtgccatccccctgtggagggtcactgccttcatcggcaacaacata
gtgacggctcagatcatttgggaaggtctttggatgaattgcattgtccagagtacaggt
cagatccagtgtaaggtgtacgacagcttgctagctctgcccagtgacatgcaggctgcc
cggggcctcactgtgttctccatcctgctctgcggcctggctctggctctgggggtcctg
ggagtcaagtgcaccaagtgtatcggcgtaaacagcctcaaggcccgcattgctcgcatc
tctggagcccttttcgctattgcagggttcctctaccttgtgcccgtctgctggactgcc
cactccatcatcagggatttctatgacccacatgtggcagctccacacaagcgcgagctt
ggccctgccctttacatcggctggggggcctcagccttgctccttattggaggatctctg
ctctatgccgggtcaagtcctcctggcataccaggctctcccaccttcagcagtggagaa
agcagtcctcgcagggcacctgccacacaggtcaaaggttatgtctaa
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integrated database retrieval system