Lates calcarifer (barramundi perch): 108902693
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Entry
108902693 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: BAH and coiled-coil domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
108902693
NCBI-ProteinID:
XP_018560168
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All DBs
Position
LG11:9303779..9367232
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AA seq
2925 aa
AA seq
DB search
MEGRDFAAPAHLLSERGALVHRAASRIAPSGHSSVQHAGHFPPGKYYPSHIPMAPHSGSG
LMGNSSASFMGTFLASSLGSPPSHPSHPSRPPSSPSSPSFRGGPHSSASQIWFPHSHEAA
PGYPRFSGSLAHTFLPMSHLDHHANSGVLYGQHRFYDTQKENFYLRGLPSQPPLISANHS
LPPMSRAGSGHSQGSCSRERDAGVGTGLHKGLKEGSVERGVVPVKDKERSSSKQEAKERQ
QQQQHHSHQPPQPTHHHHSHSHQQHPHYPQHSLPLEEVNSRALERHKASLAMEYSKEHPS
MGKPLSACLHNGKMQNGDAGTGAGAKASMSSCGGEGTALGGIGGGGSSQGRHMGSSGSSR
CTKEGVSGEMRISEQPSDCLERGQAPLHHSLSYSVPPPLHMGSAAGGTHPHPHPHPHPHT
HPHPGGFHCLQLHPSHPHHPHHSHHTHHHPDFFCPPPSAPLANPASHERGPANVGREPKV
TGPTFVPSVADLGDKTSGPFQLGNPDCQGVGGGGGGSNAKDKVIEKNGGGGHHSSWHRKQ
QQQQQQQQQQQQQQQQHPYRKTEKAPDWMQSHHQHLQPSQLPPPPQQQQPPHPQQQHQVV
RSRSAECINSGVDMDVFRPSLPQGPKAGHSVPHSVNTSPYRDCSHSGPPPNSSPLGSKSM
GQHSGAGAAHGPGPGGSCSLQRDGQKVARIRHQQHGRPGPDAPSPAELNQGTNQELKRKM
DMSPYGYSNSSGQQHHHQQPPVPPWAMRPPHHMRNQEEEQRKSYMELGSTGGQHSQQQQQ
QQQPGISLPPPQPPPPAPPLNQQQQQPQQQPEPQGPTQGESSAMKSLLKYSNQQQPLLLS
QKSPFGGLGSLKSGPAGGSCALQGNKQTLPSRKGPSNDNERPDYSGRSRDMGDTGHGESE
VRQPPVGIAVAVARQREPPCRSADSHPNSRQGRVHPSVKGPPRPMYPSDPTTEEERKRMS
GEQIGLTCLDRERDTYIRDNKERVEFARIHPSNSCHSDLTSHLMVPGGTSLQSGQLGDPA
AHSAHHHWMPRTGSPSLWMTGHSYGIGHTALHQNLPPGFSAAMPGPLQPVLPLPQDPSAQ
LVVLPTEPPAHPATHHLDVMEQPGLWPPVYGARGPPSHMQHPAVYSRSQFLRQQELYALQ
QHQQLQHQHQHQHQSHQSQQPQPQSQPQQQQQQQHRATHGMDMQHQATHNAQMQKRPNEP
SVELEELISEPRTSKPAKPYSYNPPQRNTSPPGACAAHLSPCCQSPSLRPHPKSTPSTPC
PAPSPAAAAPHSPAISPXAPPQMPKGAESQDKRVEGQPPQDYPESLEPDLPPGYTYPAIA
MGYRSGPSPQDVRLAEPADLEAVQVEPAEHAPQSLSSLGEELECQAVVRPLPEPLPPEEV
EQEQEERVVDRVLEQREEVEVAANYVPGEEAAEEQGPAEEEVLVCPPAESPVCEAASCPV
PLSTVEPERPEAVITLDEEEDDEAMGEGSQVELAQKVNVPGEQEPELPTIIELDPASPAA
PEPQSPAPEGAKDSEQQRKNQMPADDALLDFVCLSPTSASSPSPSQATVAVPHKPLVPCY
WSLELLIAAAFCTDVPPFPLFPFSTPSVAPSQPNPHQGMELLSELADLELQQRKRTCGKS
QEEELLMFDLQSLATLATARALEMDSQEGSSAGSERHFPARKILNLRRKCSWTPRNEPVC
PAKGSMETMDGPELAMRVKLAELQRRYKEKQKELAKLQRKHDHQKEETPRSPARRGPGRP
RKRKPTLTTGPVSSSEGQRKVKSMGAGLAMLPEDLGGGGDSQRRKKRLSSRGFERLSSTQ
QIKAQSCRKSSLHSVLSSKLASDVAQLKQKAQGKKNLSGTGSRDKEVSPCNSNPKHGHRS
QGTSKVESRRESGGQSDTAASVDSGPQESWTGLVRRGRKKGSTTLTQGSLLSQARPKVLR
GQRQEAMAEEESSPAESDSSDQEDEEEEGSYDTDEGHDYRAQPPRDVTSSSSVTGPSPSS
VVKLEANQKARNKKQRQELYGSQSLSGAEGEVKVRKKPPCRMGLATAVKTHREDHRPEGV
RRSCGPRPKEPRWGGLGTRGNRYRRSMGLATFPTTSERLKRATRKSTMLRGAINKRRSCW
SVGAPLLQSEEGSRGRRSRDQQPKGRAVSRLLESFAADEGFQMDGSSFSEEEEDSSCSYN
NKSPEMPNCVLTKELLTDGLKVLISKEDELLYAARVHTLELPDIFSIVIDGERGNRPRIY
SLEQLLQEAVLDIRPESEAMLSEGTRVCAYWSERSRCLYPGYVRRGGSSDEGKQGGVMVE
FDDGDRGKISLPNIRLLPPGYQIHCGEPSPALLVPSGTTAKRSCSLEQAPISDRPSDRLN
ALNTGTNSQTLTVHKRRPGRPKGSGKKQKQQQQQAESANKNPSPFLGWPSLTNTRKRTSD
NLFQLNGAPRKVLRGKEGDLFPLPQTQPLASIPAKGLFSSSSFEVDSFSSIANGYSSFCT
QSAGPGPGLSLGPRGGLYGQKRRQDELVMPRGRKSGQEFLVKLDHEGVTSPKTKNSKALL
LRSGSSSVSGMPRTEVYSHPVLLVKDNKKGGASRVELLLKGSTPQRKPSPSLRLGEYGDL
GFSSHRECHSSYSDLDDEEEEEEEERRRAALAAASGGLRTAGRFLSRLSVSSSSSGSSSS
SSSGSLSSSSLCSSDNDSSYSSEDEDSSTLMLQSCLSSHRGLLQPSEPSTSSRPHQHSFV
AKAVAVSNAKGGPTDQISNSRSLKRKECTNSTSKPKEFMKKARMLPDDTSFIPRPKMSAF
LAGRQMWRWSGNPTQRRGLKGKARKLFYKAIVRGRDTVRVGDCAVFLSAGRPNLPYIGRI
ENFWESWTSSMVVKVKWFYHPEETKLGKRHRDGKHALYQSCHEDENDVQTISHKCQVVSR
EEYECLTRIQKPNSTSTSSDLYYLAGTYDPTTGQLVTAEGVSILC
NT seq
8778 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacgggatttcgctgctccggcgcacctcctatcagagcggggcgccctggtg
caccgagccgcctctcggatcgctccctcgggccacagctctgtacagcacgccggtcac
ttcccgccggggaaatactatccctcgcacataccaatggctcctcactcaggcagtgga
ttgatgggcaattcctccgcctccttcatggggacctttctggccagtagtctgggttcc
cccccttcccacccgtctcacccctcccggccgccctcctcgccctcctcaccttccttc
cggggcggaccccactccagcgcctcgcaaatctggtttccccattcgcatgaagcagct
ccagggtatcctcgattctcagggagtctggcccacactttccttcccatgagccacctg
gatcaccatgccaacagtggagttctctatgggcagcaccgtttctatgacacccaaaaa
gagaacttctaccttcgaggtctcccgtcccagcctcctctcatctcagccaatcacagt
ctgccaccgatgtccagggcaggttcaggccactctcaggggtcctgcagtagagagaga
gatgctggggtagggacaggtctacataagggtcttaaagaggggtctgtcgagagagga
gtggtacctgtcaaggacaaggagaggtccagtagcaaacaggaggcgaaagagagacag
cagcagcaacagcaccacagccaccagccaccccagcccacacaccaccaccattcccac
tcccatcagcagcacccacactatccacagcactcactgcccctggaggaggtcaacagt
cgggccctggagaggcacaaggcatcgctcgcgatggagtacagcaaggaacaccccagt
atgggcaagcccctcagtgcctgcctgcacaatggcaagatgcaaaatggagatgcagga
actggagcgggggctaaggcttccatgtccagctgtgggggggagggcacagcccttggg
ggtattgggggtggggggagcagccagggcagacatatggggtccagcggcagtagtcgc
tgcaccaaagagggggtaagtggggagatgcggatcagtgaacaaccttcagactgtctt
gaaagggggcaggcaccactccaccactctctgtcctactctgtaccaccacccttacac
atgggttccgctgctggggggacacacccccatccacatcctcatcctcacccacataca
catcctcacccagggggcttccactgccttcagctccaccccagccatccacaccaccca
catcattcccaccatacacaccaccatccggacttcttctgcccacccccttctgctcct
ctagccaaccctgcctcacatgagagggggccagccaatgtggggcgagaacctaaagtc
acaggacctacgtttgtgccatctgtggcagaccttggggacaaaactagtgggccattc
cagcttggtaaccctgactgccagggtgtgggcggtggagggggaggcagcaatgccaag
gacaaggtaatagaaaagaatggaggcggtgggcatcatagtagttggcacagaaaacag
caacagcagcagcagcaacaacaacaacagcagcagcagcagcagcagcacccatacaga
aagacagagaaggctccagactggatgcagtcccaccatcaacaccttcaaccctcacag
cttcctccacctcctcaacaacaacaacctccacatccacaacagcagcaccaggttgta
cgatcacgcagtgctgagtgtattaacagtggtgtggacatggatgtgttcagaccctcg
ctgccccaggggcccaaggctggacactctgtccctcattctgtaaacacttctccttac
agagactgttcccattcaggaccccctcctaattcctccccacttggaagtaaaagcatg
ggtcaacatagtggggctggagcagcccatggccctggtccaggaggtagctgctcctta
cagagagatggccaaaaggtagccaggatacgccaccagcaacatggccgacctggccca
gacgccccttctcctgctgagttgaaccaggggacaaatcaggagctgaaaagaaagatg
gacatgtctccttatggttacagcaacagcagtgggcagcagcaccaccaccagcagccc
ccggtgccaccctgggccatgaggcctccccaccacatgcgcaaccaggaggaagagcag
aggaagtcctacatggagttagggagcactggtgggcaacactctcagcagcagcaacag
cagcagcagccaggaataagcctgcctcctccccagcctcccccccctgcacctcccctc
aatcagcaacagcagcagccacagcagcaacctgagccccagggtccaacccagggagag
agcagtgccatgaaaagcttactaaagtacagcaaccagcagcagccactgctcctctcc
cagaaaagcccctttggggggctgggaagcctcaaatcaggtcctgctggtgggagctgt
gccctgcagggcaataaacagactctaccttccaggaagggcccctccaatgacaacgag
cgccctgattacagtgggcgtagccgggatatgggggatacaggtcatggggaaagtgag
gtgcggcagccgccagtaggaattgcagtggcggtggccagacaaagggagccaccttgt
cgctcagcagacagtcatcccaatagccggcagggcagggtacatccctctgtgaaagga
ccgccccgccccatgtatccttcagatccaaccacagaggaggagaggaagaggatgagt
ggggaacagataggtctgacttgcttggacagagaaagagatacatacatcagggataat
aaggaaagggtggagtttgcgaggatccacccctccaacagctgtcacagtgacctcacc
tctcatctcatggtccctggcgggacttccctccagtctggccaattaggagatcctgct
gcacattctgctcaccatcattggatgccaagaactggaagcccatctctctggatgaca
gggcattcttatggtataggtcatacagccctgcaccagaatctgcccccaggtttctct
gcagccatgccaggccctctgcagccagtcctgcctctgcctcaggacccctcagcgcag
ctggtggtcctgcccactgaacctcctgcccatcctgcgacccatcacctggatgtgatg
gagcagccagggctgtggccccctgtgtatggcgcccggggcccaccctcccacatgcaa
catcctgctgtgtactccagatcccagtttctacggcaacaggagctgtatgctctccag
cagcatcaacagctccaacatcagcatcaacatcagcaccagagccaccagtcacagcag
ccgcaaccacagtctcaacctcagcagcagcagcagcagcagcacagggctacacatggc
atggacatgcaacatcaagccactcataatgcacagatgcagaagaggccaaatgagccg
tcagttgagctcgaggagctcatttcagaaccccgaacgtccaaacctgccaagccctac
tcttacaaccctcctcagaggaacacctctccccccggggcctgtgctgctcacctgtcc
ccttgttgccagtccccatcactgcgaccgcatcccaaaagcactccctcgacaccctgc
cccgccccgagccctgctgcggcagcccctcactcacctgccatcagccccnntgccccg
ccacagatgcctaagggggctgaatcccaggacaagagagtggaggggcagcccccgcag
gattacccggagtctctggagcctgacttgcctcctggatacacctaccctgctattgcc
atgggctacaggagtgggccctcccctcaggatgttcgactggctgagccagccgacctg
gaagcagtccaagtggagcctgctgagcatgctccccagtctctgtccagcctgggggag
gagctagaatgccaagcggtggtcaggcccctccctgagccactcccacctgaggaagtg
gagcaggaacaggaggaaagagtggttgacagagttctggaacagagggaggaggtggag
gtagcggccaactacgtgcctggggaggaggcggcagaggagcaggggcccgctgaggaa
gaggtgctggtttgcccccctgccgagagcccggtgtgcgaggctgcttcctgtccagtc
cccctttcaacagtggagcctgaaaggccagaggctgtcatcaccttggatgaggaagag
gatgatgaggcgatgggtgaggggagccaggtggagcttgctcaaaaggtcaacgtgcct
ggagagcaggagccagagctgcccaccatcatcgagcttgacccagcttcccctgcagcc
cccgagccacagtccccggcccctgaaggagcaaaggacagcgagcagcagcgcaagaac
cagatgcccgctgatgacgccttgttggattttgtgtgtctctcccccacctcggcttct
tcccctagcccaagccaggcaactgttgctgtgccccacaaacctcttgtgccctgctac
tggagtctggagctgctgatcgctgctgcgttctgcacagacgttcctccatttcccctg
tttccttttagcaccccatcagttgctccatcgcagcccaacccccaccagggtatggag
cttctgagtgagctggcagatctggagctgcaacagcgaaagcgcacctgtgggaaaagc
caggaagaggagttgttgatgtttgacctccagagcctcgctaccctggccacagcccgt
gcactggagatggactcccaggaaggcagcagtgcgggttcggagcgacacttcccagcc
cgcaagatcctcaatttacgtaggaaatgtagctggacgcctcgcaatgagccagtgtgc
ccggccaaaggtagcatggaaacaatggacggtcctgagcttgcaatgcgtgtgaagttg
gctgagctacagcgtcgctacaaggagaagcaaaaggagctggccaaacttcagaggaaa
cacgatcatcagaaggaggaaacacctcgcagcccagcgcgacgaggaccggggcggcca
aggaagcggaaacccaccctcaccacaggtccagtgtcctcgtctgagggccaaagaaaa
gtcaagtcgatgggggcggggcttgccatgttgcctgaggacctaggagggggcggagac
agccagagaaggaagaagaggctgtccagtcgaggctttgagcgacttagcagcacacag
cagataaaagcacagagctgcagaaaaagcagtcttcacagcgtgctcagctccaagctg
gccagtgatgtggctcagctcaaacagaaagcgcagggtaaaaagaatctctcagggact
ggctccagggacaaggaggtttcgccctgcaactccaaccccaagcatggacacagaagc
cagggcacgagcaaagtcgaatcccggcgagagtctgggggacaaagtgacacggcagcc
agcgtggacagtggaccccaggagagctggactggactggtgcgacgtggacgtaaaaag
ggatccaccaccctgacacagggctcccttctgagtcaggccaggccgaaggttctccgt
ggtcagaggcaggaggcaatggcagaggaggagagctcccctgcagagagcgactcctct
gaccaagaagatgaagaggaggaaggcagttatgatacagatgaaggtcacgactacaga
gcccaaccccccagagacgtcacttctagctcctccgtgacaggtccaagtccttcgtct
gttgtaaaactggaggccaatcagaaagccaggaacaaaaaacaaagacaggagctttat
ggctcccagagtctttctggagcagagggggaggtcaaagtaaggaagaaacccccctgt
aggatgggcttggccactgcagtcaaaacccaccgtgaggatcaccgacccgaaggggtt
agaaggtcgtgtgggcccaggccaaaggagcctcggtggggtggcctcggaactagaggc
aaccgctaccggaggagcatgggactggctaccttcccgacaaccagtgagaggctgaag
agggcgacccgcaagagcaccatgctgagaggagcaatcaataagaggagaagttgctgg
tcggtcggggccccacttttgcagagtgaggagggaagcaggggccgaaggagcagggac
caacagccaaagggaagagccgtgagccggctgctggagagctttgcagctgatgagggc
tttcagatggatggcagcagcttctcagaagaagaggaggacagcagctgttcatacaac
aacaaaagccctgaaatgcccaactgtgtcctgaccaaagaactcttaactgatggactg
aaggtgctgatctccaaggaggatgagcttctctacgcagccagggtccacactctggag
ctcccagacatcttcagcattgttattgatggtgaaagaggaaaccgcccaagaatctat
tcactggagcaactgctacaggaagctgtcctggatatacgtccagagtcagaggctatg
ctcagtgaaggaaccagggtgtgtgcttactggagtgaacgctcacgctgcttatatcca
ggctatgtgcgcagaggtggttcatctgatgaggggaaacaaggaggagtgatggtagag
tttgatgatggagacagagggaagatttctctgccaaacatccgcctcctgcctccagga
taccagattcactgtggggagccatctcctgccctgctggtacccagcgggacaacagcc
aagagaagctgcagtctggagcaagcccccatcagtgacagaccctctgacagactcaac
gctctcaatactggaaccaacagtcaaactctaactgttcacaaaagaagaccagggaga
ccaaagggctctgggaaaaaacaaaagcaacagcagcagcaggctgagagtgccaataaa
aatccttcaccattccttggttggccctcactgacaaacaccaggaagaggacgtctgac
aatctgtttcagctcaatggtgcacccaggaaggtcttgagagggaaggagggtgacctg
ttccccttgcctcaaacccagccactggcctccatcccagccaaaggccttttcagcagc
agctcctttgaggtggactccttcagcagcattgcaaatggctactcctccttctgtact
cagtctgcaggaccaggcccaggtttatctctgggtcccagaggtgggctgtatggccag
aagcgcagacaagatgaactggttatgccaaggggcaggaagtctggtcaagagttcctc
gtcaagttagatcatgaaggagtgacctcccctaagacaaagaacagcaaggctctgctg
ttgcgtagcggatcttccagtgtgagtggcatgccaaggacagaggtatactcccaccca
gtcctgctggttaaagacaacaaaaagggtggtgcctccagagtcgaacttctcctgaaa
ggatcaacaccccaaaggaaaccctccccttccctgcgtctgggggaatatggtgacttg
ggcttcagctcccaccgagagtgtcacagctcctactctgatctggatgacgaagaagaa
gaagaagaagaagagaggaggagggctgcactggctgcagcctcaggaggactaagaacg
gctggccgtttcctctctcgtctctctgtctcgtcctcctcttctggttcttccagctcc
tcctcttcaggctctctctccagttccagtctgtgttcctctgacaatgattcctcctac
agctcagaggacgaggacagttctacactaatgcttcagagttgtctgtcttcccaccgg
gggctcctgcaaccatctgaaccctccacttcttcaaggcctcatcagcactcctttgtg
gccaaagctgtggctgtttccaatgccaaaggaggccccactgaccagatctccaacagc
aggtctttgaagaggaaagaatgcaccaactccacctctaaacctaaggaattcatgaaa
aaagctaggatgcttccagatgacacctcatttattccaagacccaagatgtctgcattc
cttgcaggacgacaaatgtggaggtggtcaggaaaccctacacagaggcgaggtctgaag
ggtaaggccaggaagctcttctataaagccatcgtacgaggcagagacacagttagagtg
ggcgattgtgctgtgttcctctcagctggacgccctaacctcccatacattggcagaatt
gagaacttctgggaatcctggacctccagcatggtggtcaaagtcaagtggttctaccac
cctgaagagaccaagctaggcaagaggcatcgagatggcaagcatgccctgtaccagtca
tgtcatgaggatgagaatgatgtccagacaatctctcacaagtgccaggtggtgagcagg
gaggagtatgagtgtctgactcgcattcagaagccaaacagcaccagtacctcctcagac
ctctactacctggctgggacgtatgatcccaccactggtcaactggtcactgctgaaggg
gtttccatcctgtgctga
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integrated database retrieval system
