KEGG   Lates calcarifer (barramundi perch): 108902714
Entry
108902714         CDS       T04895                                 
Symbol
tubb4bl
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04517  IgSF CAM signaling
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108902714 (tubb4bl)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108902714 (tubb4bl)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108902714 (tubb4bl)
  09142 Cell motility
   04814 Motor proteins
    108902714 (tubb4bl)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108902714 (tubb4bl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108902714 (tubb4bl)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108902714 (tubb4bl)
   04147 Exosome [BR:lcf04147]
    108902714 (tubb4bl)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108902714 (tubb4bl)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108902714 (tubb4bl)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108902714 (tubb4bl)
  Exosomal proteins of colorectal cancer cells
   108902714 (tubb4bl)
  Exosomal proteins of bladder cancer cells
   108902714 (tubb4bl)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108902714
NCBI-ProteinID: XP_018560203
UniProt: A0A4W6G029
LinkDB
Position
LG11:complement(8536476..8539467)
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEGEEEVA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgcgaaattgtgcatttgcaagccggtcagtgcggaaaccagatcggagccaagttc
tgggaggtgatcagtgatgagcatggcattgatcccactggtacctaccatggagacagc
gatctgcagctagacaggatcagcgtctattacaatgaggccacaggtgggaagtacgtg
ccccgtgccatcctggtggatttggagcctggtaccatggactcagtcaggtctggtccc
ttcgggcagatcttcagacctgacaactttgtctttggccagagtggagccggaaacaac
tgggccaagggccactacacagagggagccgagctggtggactccgtcctggacgttgtg
agaaaagaggcagagagctgcgactgcctccagggctttcagctcactcactccctgggt
ggtggcaccggctctggcatgggcaccctcctcatcagcaaaatccgcgaagagtacccc
gaccgtatcatgaacaccttcagcgtggtgccttctcctaaggtgtccgacaccgtggtg
gagccctacaatgccaccctctccgtccaccagctggtggagaacactgacgagacctac
tgcattgacaatgaagctctttatgatatctgcttccgcacacttaaactcaccaccccc
acctatggcgatctcaaccatttggtgtctgccaccatgagtggagtgaccacctgcctg
cgtttccccgggcagctcaacgccgacctccgtaaactagctgtcaacatggtgcccttc
ccccgtctccacttcttcatgccaggcttcgcccccctcaccagcagaggcagccagcag
taccgctccctgtctgtgcccgagctcacccagcagatgtttgacgccaagaacatgatg
gccgcctgcgacccgcgtcacggccgctacctcaccgtggccgccgtgttcaggggccgc
atgtccatgaaagaggtggacgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgttgagtggatccccaacaacgtgaagaccgccgtctgcgacatcccgccccgcggc
ctcaagatggccgccactttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctctgagcagttcaccgccatgttccgccgcaaggccttcctccactggtacaccggc
gagggcatggatgagatggagttcacagaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccaccgcagaggagggcgagtttgaggaagagggagag
gaggaggtcgcttaa

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