Lates calcarifer (barramundi perch): 108902716
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Entry
108902716 CDS
T04895
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108902716
03037 Cilium and associated proteins [BR:
lcf03037
]
108902716
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108902716
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108902716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108902716
NCBI-ProteinID:
XP_018560206
UniProt:
A0A4W6G1M0
LinkDB
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Position
LG11:9545504..9554587
Genome browser
AA seq
784 aa
AA seq
DB search
MADGGSFNVNICEIDADYENLEEGEPEQDSFLQYMVELAASTQSCPETLEMDVIRERKDS
SSTSSDDTQDEAPDTEHISSLQRQHWSAATLKVLSSMPSRTAGQNSAAVISRRFRHPQLH
RHQTSSRDSFQPSGLIQVDFSEADVVEVSAEESKMEQLASNFRGLSLSEGMRKLRAMPLS
LGEKMELRRLAFSDEVKSSLISRNIPCYRSLSEGISRTWRHCMFSCLPILSSLQLWHSAM
KRLSGRYGTGVLSYFLFLRTLLRFNLLLFVINGLFVVFPQAVHPPCHPPNNNYTPTGLEL
FTGTGYLTQSIMFYGYYTGSITETCQSPESTQTMPYNIPAAYFFTIAIAFFIICMILVYR
ISKSIGKSFHVLKSNGNLAVQVFCTWDFKLSKKSSVRFLSEKISTQLKELLSEVISQEDE
KSCMQRLCRLSVHLLAWAMCLASIFLGTMGVYYLSEDPTEESPDAFKLLRLSAVVSSLNL
LLPGLFNLCAWVERQDSPSVRVYVSIFRNLLLKVSIVGVLCYRWLGKIAEGPENHDLKCW
ESFVGQELYRLLLMDFIFTVIYIFLGEFLWRLFSKQVLKRNRKPVFDIARNVLELIYGQT
LTWLGVLFAPLLPAVQIIKLFVLFYMKKSSLMLNCQASRKPWRASQMTTLFISLLFFPSF
LGSAVSVSYTIWKIKPSSGCGPFRNLTTMFQSGKLWHQKLESTYPVLSWLSWVYNSLVEN
PLFLFLASGVLIMVIYFHTQVVDGQRRIISLLEKQIENEGKDKKFLITKLQDICEQNSVV
SPQR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtgggagcttcaatgtcaacatctgtgaaatagatgctgactatgagaac
cttgaagagggtgaaccagaacaggactccttcctgcagtacatggttgaactagcagcc
agcacccagagctgccctgaaaccctggagatggatgtgatcagagaacgcaaagacagc
agctcgaccagcagcgacgacacgcaggatgaggcccctgacacagagcatatcagctct
ctgcagaggcaacactggtcagctgctacactaaaggtcctctcttcgatgccaagtcgc
actgctgggcaaaatagtgctgcagtcatttcccggcgtttccgtcatccccagctacac
cgacaccagacgtcttcccgtgattcctttcagccctctggactgatccaggtcgacttt
agcgaagctgatgtggtggaagtcagtgctgaagaaagcaagatggagcagttggcttcc
aactttcgaggcctctcactgagtgagggcatgcgcaagctgcgagccatgcccctcagc
ctgggagagaagatggagctcaggcgacttgctttcagtgatgaagtgaaaagctcactc
atcagcagaaacatcccctgctacagaagtctcagtgagggtatttcgaggacatggcgt
cactgcatgttcagctgcctccccatcctcagctccctccagctgtggcattcagccatg
aagagactgagtgggcgttacggaaccggggtgctctcctacttcctgtttctccgaacc
ctcctgcgctttaacctcctgctcttcgtcatcaacggcctgttcgtggtcttccctcaa
gccgtccaccctccttgtcatcctcctaataacaattacactcccactggcctggagctt
ttcactggcactggctacctcactcagagtattatgttttatggctactacaccgggagc
atcaccgaaacttgtcaatctcctgagtcgacccagacaatgccatacaacatacctgca
gcatacttcttcaccattgccatcgctttcttcattatctgcatgatcctggtgtacagg
atatccaagtccatcgggaaaagttttcatgtcctcaagtctaacgggaatctggcggta
caagttttctgcacatgggactttaagctcagcaagaagtcatcagtccgatttctgtct
gagaaaatcagcactcagctcaaagagctcctgtctgaggtgatcagccaggaggatgag
aagagctgcatgcagcgactctgccgcctctcggtgcatctgttggcatgggcaatgtgt
ctagccagcatcttcctgggcaccatgggagtctactacctgtcagaggaccccactgag
gagagtcctgacgcgtttaagctgctgcgcttatctgctgtggtgtccagccttaacctg
ttactacccggcctcttcaacctgtgtgcctgggtagagagacaagactcacccagtgtt
cgtgtctatgtctccatcttcaggaacctgttgctgaaggtcagtattgttggagtgctg
tgttaccgctggctggggaaaattgcagagggaccagaaaatcatgatttaaagtgttgg
gaaagctttgtggggcaagaactgtatcgcttgctcctgatggacttcatcttcactgtc
atttacatttttctgggcgagttcctgtggaggctattttccaagcaagtgctgaaaagg
aacaggaagccagtgtttgacattgctcgtaatgtgctggagctcatatacggacaaact
ctaacttggcttggggtgctgtttgccccactgcttcctgcagtccaaatcataaaactg
tttgtgctgttttacatgaagaagagcagtctgatgctcaactgtcaggcctccagaaag
ccctggagggccagtcagatgacaactctattcatctctcttttgttcttcccctcattt
ctcggttctgcggtatcagttagttacacaatttggaagattaaaccttcatcggggtgc
ggtcctttcaggaatctcaccacaatgtttcagtcagggaagctttggcaccagaagctg
gagagcacctacccagtcctttcttggctcagttgggtctataactctctggtagagaac
ccattgttcttattcctcgcatctggagtcttaataatggtgatatattttcacactcaa
gttgttgatggccaaaggagaatcatcagtctgttagaaaagcaaattgaaaatgagggt
aaggacaaaaagttcctcatcaccaaattgcaagacatttgtgaacagaacagtgtggtt
tcccctcagagataa
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