Lates calcarifer (barramundi perch): 108902729
Help
Entry
108902729 CDS
T04895
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03320
PPAR signaling pathway
lcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108902729 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
108902729 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108902729 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108902729 (slc27a1a)
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108902729 (slc27a1a)
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
108902729 (slc27a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6389
Motif
Other DBs
NCBI-GeneID:
108902729
NCBI-ProteinID:
XP_018560233
UniProt:
A0AAJ7VLN7
LinkDB
All DBs
Position
LG11:complement(8176886..8183001)
Genome browser
AA seq
648 aa
AA seq
DB search
MHNAASVSVSLGSMGLLRLFGVSWSWSLAAGLGVYLGTRSWKYFYIAARTAKRDLNGLYV
LLRVKLALWRYMRNGSNIPSIFAQTVKLHPNKPALIYETTGETWTFTQLDELSNAVAHWA
RGQGWVSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRHDSLLHCIGVSGSRAIV
FGAELADAMLEVSSSITQSMVRFCTGDLSAEHLARLGAQPLDPLLASASRHPPSTCVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYYAFRMRPDDIIYDCLPLYHSAGNI
MGVGQCLIHGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKGHKV
RLAVGNGLRPSVWEAFTERFEVAQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLVRVDEDSMELIRDSRGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAH
NVFKNNDSAYLSGDVLVMDDLGYMYFRDRGGDTFRWRGENVSTTEVEGTLSSLLGQTDVA
VYGVAVPGVEGKAGMAAIADTIGSFDCSDFLQKIQRALPPYARPVFLRISPHVDTTGTFK
IQKTRLQREGYDPRLTTDQIYFLNTRAARYEAVDEELYNAIAEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcagcgagtgtctcagtctctctggggtctatgggactgttgcggctcttc
ggggtgtcctggtcctggagtctggcagcaggccttggggtatatctagggacaagaagc
tggaaatacttctacattgcagcgcgcaccgccaagagagacctcaatggcctgtatgtg
cttttgagagtgaagctggctttatggcgttacatgcgcaatggaagcaacattccctct
atctttgcccagacagtaaaacttcacccaaataaaccagcactgatctatgagactact
ggggaaacatggaccttcacccagctcgacgagctgtctaacgcagtagcccactgggca
agaggtcagggatgggtctccggcgatgtggtggccctcttcatggaaagcaggccgtta
caggtggcactttggctgggcttggccaaggttggggtggaagctgcgctcatcaacttc
aacctccgccacgattccctcctgcactgcattggggtgtcagggtcacgggctattgtg
ttcggagctgagcttgctgatgccatgttggaggtgagttcctccatcacccagtccatg
gtacggttttgtacaggagacctcagtgcagaacatctggcccgtctgggtgctcaacct
ctggacccacttttagcctctgcatctagacatcccccttcaacttgtgttcctcccaaa
ggcatgaatgaccgtctgttttatatttacacctctggcaccacaggactgcccaaggct
gccattgtggtacacagtcgttactaccgaatcgctgcttttgggtattatgcctttcgc
atgcgccctgatgacatcatctatgactgtctgcctctctatcactcagcaggtaacatc
atgggggtcgggcagtgtctgatccatggcctcactgtggtagtgaagaagaaattctct
gccagccgtttctgggaagattgcattaagtacaactgcactgtggtacagtatatcggg
gaaatctgccgctacctcctgtctcagccagtgcggccatcagaaaagggccacaaagtt
cgtctggcagtgggaaatggtttgcgccccagtgtgtgggaggctttcacagaacgcttt
gaggtggcacagattggcgaattctatggagcaactgagtgcaactgcagcattgccaac
atggatggcaaggtgggagcctgtggattcaacagtcgaattctccccaatgtgtacccc
atccgtctggtgagggtagacgaggacagcatggagctaattcgtgacagccggggcctc
tgtgtgccttgccgccccggggagccagggcttctggtaggtcgtatcaaccagcaggac
cctttacggcgattcgatggctacgctaatcaggatgctacaaggaagaaaatagctcac
aatgtcttcaaaaataatgattctgcatatttatcaggtgacgtgctggtgatggatgac
ctgggctacatgtacttccgggaccgcggcggagacactttccgctggcgaggagaaaat
gtttccaccaccgaggtggagggcacactcagtagtcttctgggtcagactgatgtagca
gtgtatggtgtggcagtgccaggtgtggaaggtaaggcaggcatggctgccattgcagac
actatagggagttttgactgcagtgacttcttgcagaaaatccagcgagctcttcctcca
tatgctcgccccgtgttcttgcgaatctccccacatgtagacaccacaggtacatttaaa
attcagaaaaccaggctgcagagagagggatatgacccacgtctcacaactgaccagatc
tactttttgaacaccagggctgcacgttatgaggctgtagatgaggagctatacaatgct
atagcggaaggaagaatgtctctatga
DBGET
integrated database retrieval system
