Lates calcarifer (barramundi perch): 108902731
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Entry
108902731 CDS
T04895
Symbol
ptger1c
Name
(RefSeq) prostaglandin E receptor 1c (subtype EP1) isoform X1
KO
K04258
prostaglandin E receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108902731 (ptger1c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108902731 (ptger1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108902731 (ptger1c)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Lipid
Prostaglandin
108902731 (ptger1c)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
108902731
NCBI-ProteinID:
XP_018560235
UniProt:
A0AAJ7QMX9
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Position
LG11:complement(8183142..8186841)
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AA seq
385 aa
AA seq
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MAFRVKTPSVLITLFSTSSTPSILHQNMKINSSESPWLNSSTSPVIRPSGIGMSCFTMTF
GAISNLTALGILAKSRVRFRRQSKAPFLLLTVALLLADLGGHVILGAFAIYLHMDQRYKM
QVEKPTTFCQVFGASMVFFGLCPLLLGCAMAIERFVAITQPFFHTAMITVTHARRVVLFL
SSLALMLAVLPLFAVGTYTIQFPGTWCFLPIYGPQSKANTNLALAFSCLGLIALTLSLLC
NILSGLALLQARIRPHNANTKSTARCIRRLSSASTSSLFCSLDVEMMAQLAVITVVSCVC
WSPFLIHILVTQLNQSSRASTQEQDGFILLGLRMASWNQILDPWVYILLRKAVLSRVCCA
CYTQRPRERTNSFCADSHRQTFSLQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagggtgaagacaccgtctgtactcattactttattttctacctcttctacg
ccatccatcctccaccagaacatgaagatcaactcctctgaaagtccctggctgaacagc
agcacctcgccagtcatcagaccctcaggcattggaatgtcctgcttcactatgactttt
ggggccatctccaacctcaccgctctgggtatcctggctaagtcccgtgtccggttccgc
cgccaatccaaagcaccattcctgctattaacagtggctttgctattggctgacctggga
ggtcatgtgatcctaggtgcctttgctatatatttgcacatggatcagaggtataaaatg
caggtcgagaagcccactacattttgtcaagtctttggggcaagtatggtgttttttggc
ttatgccctttgctattaggctgtgcaatggctattgagcgcttcgtggccatcacccag
cccttcttccataccgctatgattacagtgactcatgcacggcgagttgtgttatttctg
tcctctcttgcactcatgctggcagttctacctttatttgctgtggggacttatactatc
cagtttcccggcacatggtgtttcttgcctatctatggtccacagtctaaagctaacacc
aatctggctctggccttctcatgtctgggcctcattgcactcactctttctctgctctgc
aacatcctgagtggtctggcattgcttcaggccagaataaggccccacaatgctaatacc
aaatcaacagcccgctgcatccgtcgactatcttctgcatcaacttcctccttgttttgt
tcgttggatgtggagatgatggcgcaactggcagtgatcactgtggtttcctgtgtgtgc
tggagtcccttccttatccacattcttgtgacgcagttaaaccaaagctccagagcctca
acacaagagcaagatgggttcattcttctgggtttacgtatggcctcctggaatcagatc
ttggacccatgggtttacatcttactgaggaaagctgtgctctccagagtttgctgtgct
tgttacacacagagacccagagagagaacaaatagcttctgtgcagacagccacaggcag
accttcagtcttcagtga
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