Lates calcarifer (barramundi perch): 108902789
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Entry
108902789 CDS
T04895
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108902789
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108902789
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Ferlins
108902789
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108902789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
108902789
NCBI-ProteinID:
XP_018560298
LinkDB
All DBs
Position
LG14:complement(13255894..13327391)
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AA seq
2133 aa
AA seq
DB search
MLRVFVLCAERLQTPDNDISDAYCQIIYEGSKKKTKVIKNNPNPVWNEGFEWDLKGIPLD
SGAELHCVVKDHEKMGRNRFLGECRLALRDVLNSPSLAASFTISLLDTKRNNTGATLTLQ
VSYIPPPGAAPIFQPPSQPETFPHPNPSVELDTVTMISLDTMGEEDTESMMMIEPTEDQG
PDDGRSMVIVGPQGPTGQESPTAQTPKRSPPTYNTHGGLRKRRRGASSHSKPLPNKPQDL
QVRVRIIEGRQLPGINIKPVVKVTVAGQTKRTRIRKGNNPVFDETFFMNFFETPSDLFDE
PIFITVCDSRSLRTDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVRGYLKVS
LFVLAAGDEPPADRRECVEDKEDIEGNLLRPAGLSLRGAVFTLRIFRAEDLPQMDDAFID
GMRQILGFDSNRKNLVDPLVEIHFAGKTVCTKTLEKNANPQWNQSLAMPIRFPSMCEKMR
IRILDWDRASHNDVIGTTHLCMSKVSAPGGEIDDDLTPRTVHPGIDDSLGFLPTFGPCFV
NLYGSPREFTAFTDPHESLNLGKGEGVAYRGRVLLELTTKLVDKPEQRTEDIPSDDLLVV
EKFLRKRKFSLFVAFYSATLLQDVDDAVQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFD
GCHYYYLPWGNVKPVVVLSSEWEDIKPRIEALNMLLAIIDRLEANLQRVQLEVKAGSELE
EVELRVVELLDQVITDCREELPSLAQWQCATPLDRSLRHIRTLHLQQIVAAALALKHGPA
TELSTVLEQAEDWANRLRTMAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHTVIFSQEHCG
KHCGQLQTVFLKYPQGTGGEAKLPGQLRVKVWFGLAADVKHFNQFAEGKLSVFAETYENQ
TRLALVGSWGTTGLTYPKFSDVTGRVKLPKESFKPSPGWSWAGDWYISPEKTLLFDVDAG
HMTFTEEVFENQMRLPGGQWIGMPEGYTDVNGEKAVPKDEVECPPGWVWEEVEWSEDLNR
AVDDQGWEYGITIPPDRRPKSWVPAEKMYHTNRRRRWIRMRRRDQQKIDALRKQRPDEVE
REGWEYASLFGWKFHLKPRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLSSIEDKSDD
KSVTTTFGVNRPTISCFFDRGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQRT
VTVRNTLNPTWDQTLIFYELEIFGDPDATVANPPNIVVEFYDQDTYGADEFMGRCVCQPT
VTPSPRLAWFPIRRGEKNAGELLAAFELIRREKPAIHHIPGQEGDIVATTHVLDELLLSG
FLSENLQQWPDESDLPYPPPQREPNVFMIPQGIKPVLQRTAIEILAWGVRNLKSFQLASV
TSPSLQVECGGTMIQSCVIRSMKKKPNFDVNMLILDVRLPCEELYMPPIVVKVIDNRQFG
RKPVVGQCTIRSLEEYRCSPEEERVAVEEEEDGWRRETPHLISGEVFIDIDDEEPLVPDQ
LADGASSAIINLSTSSSSLHEEEFMDWWSKFYTSTGEKNKCGTYLERGFDTLKVYDQELE
KVEGFEGLSDFCQTFKLYRGKSQDEGEDPSVVGEFKGMFKIYPLPDDPSTPAPPRQFRKL
PPNGIEECLVRVYVIQAQGLQPKDTNGKCDPYVKITLGKKTISDHENYIPCTLDPVFGKM
FELICSLPLDKDLRVMLYDHDMLTKDEKIGETVIDLENRFLSKYGAMCGLPQSYCVSGVN
QWRDQLTPRQLLNRVCERQNLRKPVYQDDVVHFRGDQYTAADLEDKHESKRHLGPIKERL
ALHILRKLGLVPEHVETRPLYSPLQPDIQQGRLMMWVDLFPKSLGPPGPPFNVTPRKAKK
FFLRCIIWNTSDVILDDVSISGEKMSDIYVKGWLDGHEHNKQKTDVHYRSLGGEGNFNYR
FLFPFNYLPAEQLCVVDKKEHFWSMDKAETKLAPKLTIQIWDNDKFSFDDYLGHLVMDLN
HMLRPAKSPQKCDLQLLDQPADKLVSLFEQKTVKGWWPCTCEKDGEKIIAGKVEMSLEIV
TEQEQEERPAGLGRDEPNMNPHLEEPQRPETSFLWFSSPYKTLKFILWRRFKWFIILFII
LFFILLFLGVFLYSFPNYAAMKMVGPFGPAKKE
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagtgttcgtcctgtgtgcagagcgtctgcaaacgccggacaatgacatcagc
gacgcctactgccagatcatctatgaagggtccaagaagaagacaaaggttatcaagaac
aaccctaaccctgtttggaatgagggttttgaatgggacctgaaggggattcctctggac
tctggagcagagctccactgtgttgtcaaagaccatgagaagatggggaggaacaggttc
ctgggggaatgccggctggctctcagagatgtgctcaactctcccagcctggccgcctcc
tttaccatctccctgctggacaccaagaggaacaacacaggggccacgctgaccctacaa
gtttcctacatccctcctccaggagcagctccaatcttccagcctccttcccagcctgag
acttttccccatcccaaccccagtgtggaactggacactgtcacaatgatttctctggat
acgatgggtgaggaggatacagagagcatgatgatgatcgagcccacagaggaccagggt
ccggacgacggacggtccatggtcatcgttggccctcaggggcccacgggccaggagtct
cctactgcccagacacccaaacgttcgccgccaacctacaacacccatggtgggctgagg
aagaggaggagaggagccagcagtcattctaaacctctgccaaacaaaccacaggacctg
caggttcgtgtacggattatcgaagggcgacagttgccgggcatcaacatcaagcctgtc
gtcaaggtaacggtagccgggcagacgaagaggacccgcatcagaaaaggcaacaacccg
gtctttgatgagactttcttcatgaacttcttcgagactccatcagacttgtttgatgaa
ccgatcttcatcacggtgtgtgactctcgctctctcagaactgatgctgtgattggtgaa
ttcaagttggatgtaggcaccgtctacaatgagcacaggcactgcttcttgaggaaatgg
ctgctgttgtgcgacccggacgacctctctgcaggggtcagaggttacctgaaggtcagc
ctgttcgtcttggctgctggagacgagccaccggctgatcggcgcgagtgtgtggaggat
aaagaggatatcgaaggaaacctcctgaggccggctggtctgtctctgagaggagctgtt
ttcaccctgaggatcttcagagctgaagacctgccacagatggacgatgccttcatagat
gggatgaggcagattcttgggtttgatagcaacaggaagaacttggtggatcctctggtg
gagatccactttgctggcaaaacagtctgcactaagactctggagaagaacgccaatcca
cagtggaaccagagtctggccatgcccattagatttccctccatgtgtgagaagatgagg
atcagaattctggactgggacagagccagtcacaacgatgtcattggcaccacccacctc
tgtatgtccaaggtctctgcccctggaggagagatagacgatgacttgactccacggacc
gtccaccctggcattgatgacagtcttggtttcctgccgacattcggaccgtgtttcgtc
aacctttacggcagccccagagagttcaccgccttcacggacccccacgagtctctaaac
cttggaaaaggagagggtgtagcataccgaggtcgagttttactggagctaaccacaaag
ctggtggacaagccggagcagaggactgaagacatcccatcggatgacctgctggtggtg
gagaaatttctcagaaagaggaagttctcgctcttcgtggcgttctactcagccacgctc
ctccaggacgttgacgacgccgtgcagttcgaggtcagcatcggcaactacggcaacaag
ttcgactacacctgcctccctctggcctccaccacccagttcagcagggcagtgtttgac
ggttgccactactactacctgccgtggggaaatgtgaagccggtggtggttctgtcttca
gagtgggaggatatcaaaccgaggatcgaggctctcaacatgcttctggccatcatagac
agactggaggcgaacctgcagcgggtgcagctggaggtgaaggcaggcagtgagctggag
gaggtggagctccgagtggtcgagctgttggatcaggtcatcacagactgccgtgaggag
ctgccgtctcttgcccagtggcagtgtgcgacgcctctggaccgctcgctgaggcacatc
cgcactctgcacctgcagcagatcgtcgcggcggccctcgctctcaaacacggtccggcc
accgagctgtccacggtgctggagcaggcggaggactgggccaacaggctgaggacgatg
gctgaggagcctcagaacagtcttccagacatcgtgatatggatgctgcagggcgaccgt
cgggtggcctaccaccgcatccccgcacacactgtgatcttctcccaggagcattgtggg
aaacactgtgggcagctgcagaccgtcttcctcaagtacccacaaggcactggtggagaa
gccaaacttcccggtcagctgagggtcaaagtctggttcggattggcggcagacgtcaaa
cactttaaccaattcgctgaagggaaactgtcggtctttgctgaaacgtatgagaaccag
acgcggctcgccctggtgggcagctggggaactacaggtctgacttaccccaagttcagt
gatgttaccggaagagttaaactgcctaaagagagtttcaaaccctcgcctggatggagc
tgggctggagactggtacatcagccccgagaagacactgctgtttgatgtggacgccggt
cacatgaccttcacagaggaagtgtttgaaaaccagatgaggttaccgggcggacagtgg
atcggcatgccggagggatacactgatgtgaacggggagaaagcggtgccgaaggacgag
gtggagtgtcctccgggctgggtgtgggaggaggtggagtggagcgaagatctcaacagg
gccgtggacgatcaaggctgggagtacggcatcaccatccctccagaccgccggcccaag
tcctgggtgccagcggagaagatgtaccacaccaaccgacggaggaggtggatacggatg
agacggagagaccagcagaagatcgacgctctcaggaagcagcgtccggatgaggtggag
agggaaggctgggagtacgcctcgctgttcggctggaagttccacctgaagccgaggaag
acggacagcttcaggaggcgcaggtggaggtgccgcatggagccgctggagaagaccggg
ccggccgccatctttgccctggagtgttctctgagcagcatcgaggacaaaagcgacgac
aagtcggtgacaaccacgtttggagtcaacagaccgaccatttcctgtttctttgaccgt
ggcacccgctatcacctgcgctgctacctgtaccaagccagagacctgctggccatggac
aaagacagcttctcagacccgtacgccatcgtgtcgttcctccatcagtcccagaggacg
gtgacggtgcgcaacaccctgaatcccacctgggaccagacgctcatcttctatgagctg
gagatttttggcgaccctgacgccacggtggcgaatccccccaacatcgtcgtggagttt
tacgaccaggatacatacggtgcagatgaattcatgggtcgctgtgtgtgccagcccacc
gtgactccctccccccgcctggcctggttcccgattcgccgaggggagaaaaacgccggc
gagctgctggctgccttcgagctcatacgcagggaaaagccagcgattcaccatattcca
ggtcaagagggagacatcgtggccaccacccacgttctagacgagttgttgctttcagga
ttcctctctgaaaacctgcagcaatggccggacgagtcggaccttccgtatccgcctcct
cagagagagccaaacgtcttcatgattcctcagggaatcaaacctgttctgcagagaacc
gccattgagatcttggcgtggggtgttcgtaacctcaagagtttccagctggccagcgtt
acctccccgagcctgcaggtggagtgtggaggcaccatgatccagagctgcgtcatccgc
agcatgaagaagaagcccaactttgacgtcaatatgctcatccttgatgtgagacttccc
tgtgaggagctgtacatgccgccaatcgtcgtcaaagtcatcgacaaccgtcagttcggg
aggaagccggtggtcggtcagtgcaccatccggtctctggaggaataccggtgcagcccg
gaggaggaacgagtggcggtggaggaggaggaggacggttggagacgtgagactccccac
ttaatttctggagaggttttcattgacatcgatgacgaggagccgctggtacctgaccag
cttgcagatggagccagttcagcaatcattaacctttcaacctctagctccagccttcat
gaagaagagttcatggactggtggagtaagttctacacctcgaccggagagaaaaacaag
tgcgggacttacctggagagaggcttcgacacgctgaaggtgtacgaccaggagttggag
aaggtcgagggttttgagggtctctctgatttctgtcagacgttcaaactgtacagagga
aagtctcaggacgaaggagaagatccatcagtggtgggagagttcaagggtatgtttaag
atctaccccctgccagacgacccctccacccctgcccccccgagacagttcagaaaactt
cctcccaacggcattgaggagtgtttggtccgagtctacgtcatccaggctcaaggactg
cagcctaaagacaccaacgggaagtgcgacccctatgtgaagatcaccttggggaaaaag
accatcagcgaccatgaaaactacatcccctgtacactggaccccgtctttggaaagatg
tttgagctcatctgttccctccctctggacaaggacctgcgggtgatgctgtacgaccac
gacatgctgaccaaagacgagaagatcggcgagacggtgatcgacctggagaaccgcttc
ctgtccaaatacggagccatgtgcggtctgccccagtcctactgtgtgtcgggggtgaac
cagtggcgagaccagctgacgccccggcagctgctgaacagagtgtgcgagcgacaaaac
ctgaggaagccggtctaccaggacgacgtagtccacttcagaggagaccagtacacagct
gcagacctggaggacaaacacgagtccaaacgtcacctcggtccaatcaaggagcgactg
gcgctccacatcttgaggaaactgggattggtacctgaacacgtggagaccaggccgctg
tacagcccgctacaacctgacatacagcaggggcgcctgatgatgtgggtggacctgttc
cccaagtccctgggaccacctggacccccattcaacgtcacgccacgcaaggctaagaag
tttttcctgcgttgcatcatctggaacaccagtgatgtcatcctcgatgatgtcagcatc
agcggggagaagatgagtgacatctacgttaaaggctggctcgacggtcacgaacacaac
aagcagaagactgacgtccattaccgctctcttggcggagagggaaacttcaactacaga
ttcctgtttcccttcaactacttacccgcagagcaactctgtgtcgtcgacaagaaggaa
catttctggagcatggacaaagctgagactaaactggctcctaaactgacgatccagatc
tgggacaacgacaagttctccttcgatgactaccttggtcacctggtgatggacctgaac
cacatgctgcgtccggccaagtctccacagaagtgcgacctgcagcttctggaccagccg
gccgacaagctggtgtctctgttcgagcagaagacggtgaagggatggtggccctgcacc
tgcgagaaggacggagagaagatcatcgctgggaaggtggagatgtctctggagatcgtg
acggagcaggagcaagaggagcgaccggccggactcggcagagatgaacccaacatgaac
cctcacctggaggaacctcagcgtccggagacctccttcctgtggttctcctccccttac
aagaccctcaagttcatcctgtggaggcgcttcaagtggttcatcatcctgttcatcatc
ctcttcttcattctcctcttcctcggcgtcttcctctattccttcccgaactacgccgcc
atgaagatggtggggcctttcggaccggccaagaaagagtga
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