Lates calcarifer (barramundi perch): 108902880
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Entry
108902880 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108902880
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108902880
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108902880
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108902880
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
108902880
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108902880
NCBI-ProteinID:
XP_018560406
UniProt:
A0A4W6DVH2
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Position
LG21:415575..422497
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AA seq
596 aa
AA seq
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MATAGSAERPGRPASAAAGRSRSVSGPGVGCGSGSGSSPPEDEVAKCAACAEAHPGGSPP
CGHPACPLCLARRHSGSEERLRRRSDPERSSSRTGRRDCDSRREFFIPPALIPKSAEVLS
GPTGKHKLLLSEDREEFRRRNVLTCKDESVRRDEETGVLSDSENEEPISRRIRNISAFVR
KTKNLSAITGGSQRSRSCTDPVEDRGGKLKVSMQPAMMDRVGISHSYTAGILLSSENSRS
VSAPITAPDRRLTWRAVVTSSSLSSTPLVLPPPRPERSISPESNDSISEELNHFKPIVCS
PCTPPKRLPDGRLVEPTIVKSTPRNLTRGLQKATTYEASPAVLQKWRQIELDRQSLKVNS
KATLTSPVSELHNKTGGGEDAVKTHQSAAGDGVMSINKRRLLFDPPAGDTDTFQKQSVKI
RVPAIRYSSESSFRGSSDFESTAATPESCSGGALFGRKQSFSPYTKNSGFQSCKLVPKDS
QSPRKESDSSIHNQSTSRKGKKRKQKTKHLDSDRDSDMKRSRPVSQEAFDERYIRQIQQE
RQDRVLALKLQRQFDLENQTVNRRRSPDKYFLRSWRSNQNRRRRGLRRSRRINKKH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcagggtccgccgaacggcctggcagaccggccagcgccgccgccggcaga
tcccggtccgtgtccgggcccggagttgggtgcgggtccgggtccgggtcaagcccgccg
gaggacgaggtggcgaagtgcgcggcgtgcgcggaggctcatcccggcggcagcccgccc
tgcggacacccggcctgtccgctctgcctggcccggagacactccggcagcgaggagcgg
ctccggaggaggagtgaccccgagagaagcagcagcaggacgggcaggagggactgcgac
agccggagagagttcttcatccctcctgctctcatcccaaagtctgctgaggttttatca
ggaccaaccggaaaacacaagctgctgttgtctgaggacagagaagagttcaggaggaga
aacgttctgacctgtaaagacgaatcggtccgacgtgatgaagaaaccggagttttgtcg
gactcagagaacgaggagccgatcagcaggaggatcagaaacatctctgcctttgtcagg
aaaaccaaaaacttgtcagccatcacgggtggttctcagaggagtcggagctgcactgac
ccagtggaggaccgaggagggaaactgaaagtctccatgcagcccgccatgatggaccgg
gtcgggatcagtcacagctacaccgcaggaatcctcctctcctctgagaacagtcgttcc
gtctcggctccgatcactgctcctgaccggaggctcacctggcgagccgtggtcacatcg
tcatccttgtcgtcgactcctctggtcctccccccgccccgccccgagcgctccatcagc
cctgagagcaacgacagcatctcggaggagctcaaccacttcaagcccatcgtctgctcg
ccatgcacgccgcccaaacggctgccggacggccgcctcgtggagcccaccattgtcaag
tccacacccaggaatctgacccgaggcctgcagaaggctaccacctacgaagccagtcct
gccgtgctgcagaagtggaggcagatcgagctggatcgccagagcctcaaagtgaactcc
aaggccacgctgacgagccccgtctctgagcttcataacaagactggcggtggggaggac
gccgtaaagactcatcagtctgctgcaggagacggagtcatgtccatcaacaagaggagg
ctgctgttcgatcctccagctggagacacggacaccttccagaaacagtccgtcaagatc
cgggtccctgcgatccgttacagcagcgagtcgtctttcagaggaagttcagactttgag
tcaacagcagccactcctgaatcctgcagtgggggggcattgttcggtcgaaaacagtca
ttctcaccgtacactaagaactctggtttccagtcctgtaaattagtgccaaaggactca
cagagtcccaggaaggagtctgacagtagcatccacaaccagtctacctcaaggaaggga
aagaagaggaagcagaagaccaaacacctggactcagatcgggactccgacatgaagagg
agccggccggtcagccaggaggccttcgacgaacggtacatccgtcagatccagcaggag
cgccaggaccgggtgcttgccctgaagctgcagagacagtttgacctggagaaccagacc
gtcaaccgcaggaggagccccgataagtacttcctgcggtcctggaggtccaatcagaac
cgcaggaggcgcggcctgaggagatctcgacgaatcaacaagaagcactag
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