Lates calcarifer (barramundi perch): 108902916
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Entry
108902916 CDS
T04895
Name
(RefSeq) ATP-binding cassette sub-family F member 3 isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lcf03012
]
108902916
Translation factors [BR:
lcf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108902916
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA
AAA_29
MMR_HSR1
nSTAND_NTPase5
RsgA_GTPase
AAA_23
AAA_28
AAA_16
DUF1672
ATP-synt_ab
AAA_15
DUF87
PWI_CCDC43
Dynamin_N
RuvB_N
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
108902916
NCBI-ProteinID:
XP_018560449
UniProt:
A0A4W6FBM1
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All DBs
Position
LG21:259632..267012
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AA seq
711 aa
AA seq
DB search
MATYVDILKSEFPEIDSELFDYITGVLDSGGADFEDGEEVYDAIGGVLQEVSADSKNEDD
VRDICLQMFNTLKLNNHHGSQKQVLLDAPVQLSQISADNVSAAKDVQGIWMMKRPQNTTV
DAKKLEKAEAKLKAKHERRNEKDSQKASTPLVLEEASASQASSKKDNRVDQSGKNRSYDI
RIENFDVSFGERCLLQGAELSLASGRRYGLIGRNGLGKTTLLKMLASRSLRVPAHISILH
VEQEVAGDETAALQSVLESDTLREELLDEEKRLNARIASGNGDGTESVRLSEIYGKLEEI
EADKAPARASVILAGLGFSPKMQQQATKEFSGGWRMRLALARALFARPDLLLLDEPTNML
DVRAILWLENYLQTWQSTILVVSHDRNFLNAVVTDIVHLHSQRLDSYRGDYENFIKTKED
RLKNQQREYEAQLQYRQHIQVFIDRFRYNANRAAQVQSKLKLLERLPELKPIEKETEVTL
RFPDNFEKLSPPILQLDEVEFYYNPDHRLFSGLNLSADLESRICIVGENGAGKSTVLKLL
MGELTPVSGVRQAHRNLKIGYFSQHHVDQLDLNVCSVELLLNKFPGRTEEEYRHQLGGYG
ITGELATRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKALNKFRG
GVILVSHDERLIRLVCKELWVCEGGKVRRIDGGFDEYRDILHEQFRKEGYL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtacgtggacatcctgaagagcgagtttcctgagatcgactcggagctgttc
gattacatcacaggtgttctggacagcggcggcgcagactttgaggacggagaggaggtg
tacgatgccattggtggcgtcctgcaggaagtgtctgctgacagcaagaacgaggacgac
gtcagagacatctgtctgcagatgttcaacacgctcaaactgaacaaccatcatggctct
cagaaacaggtgctgttggacgctcctgttcagctctctcagatctctgcagacaacgtc
tcagcagccaaagatgttcaggggatctggatgatgaaacgtcctcagaacacaacggtg
gatgcaaagaaactagagaaggccgaggcgaagctgaaggctaaacacgaacgcaggaat
gagaaggactctcagaaggcctccaccccgctagtcctggaggaggcgtcggccagccag
gccagcagtaagaaggacaacagagtcgaccaatcagggaagaaccgcagctacgacatt
cgcatcgagaactttgacgtgtcgtttggagagaggtgtctgctgcagggggcggagctc
tctctggcgtcgggtcggcggtacggtctgatcggtcgtaacggtctagggaagacaacg
ctgctgaagatgttggcgagtcgtagcctccgtgtcccggcccacatctccatcctccac
gtggagcaggaagtggcaggagatgaaacagcagcgctgcagagcgtcctggagagcgac
acactgagggaggagctcctggacgaggagaagaggctgaacgctcgcatcgccagtgga
aatggtgacgggacagagagcgttcgactgtcagagatctacggcaagctggaggagatc
gaagccgacaaagccccagcccgagcctccgtcatcctggctggtcttggattctctccc
aaaatgcaacagcaagccaccaaggagttctcaggaggatggaggatgaggttggcgttg
gccagagctctgttcgctcggccggacctgctgctgcttgacgagccgaccaacatgttg
gacgtcagagccatcctgtggttagagaactacctgcagacgtggcagtccaccatcttg
gtcgtgtctcatgacagaaacttcctgaatgccgtggtaacggacatcgtccacctccac
tcccagaggctcgacagttaccgcggcgactatgaaaacttcattaaaaccaaagaggac
agattgaagaaccagcagagggagtacgaggcccagctgcagtacagacaacacatacag
gtttttatcgacaggtttcggtataacgccaacagagcagctcaggtccagagcaaactg
aaactgctggagagactacctgagctgaagcccatcgagaaagaaactgaggtcacttta
aggtttccagataactttgagaagttgtctcctcccatcctgcagttagatgaagtagag
ttttactacaatccagaccatcggctgttctctggactcaacctgtcggccgaccttgag
tctcgaatctgcatcgttggtgaaaacggcgccggtaaatccaccgtcctcaaactgctg
atgggcgagttgacgccggtcagcggagtcagacaagctcacaggaacttgaagatcggt
tacttcagtcagcatcacgtggatcagctggacctgaacgtctgctctgtggagctgcta
ctcaacaagttccctggtcggacggaggaggagtaccgtcaccagctgggaggttatggc
atcaccggagagctcgccacgaggccggtggccagtctgtcaggaggacagaagagccgg
gtcgccttcgcacagatgaccatgccatgtccgaacttctacatcctggacgagccaacc
aaccacctggacatggagaccatcgaggctctggctaaagctctcaacaagttcagaggc
ggggtcatcctggtgtcgcacgacgagcgtctgattcggttggtgtgcaaggagctgtgg
gtgtgcgaaggcgggaaggtccgacgcatcgatggtggctttgacgagtatcgagacatc
ctgcacgagcagttcaggaaggagggttacctgtga
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