Lates calcarifer (barramundi perch): 108903041
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Entry
108903041 CDS
T04895
Name
(RefSeq) hyaluronidase-4
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00076
Dermatan sulfate degradation
lcf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108903041
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108903041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcf02042
]
108903041
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108903041
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108903041
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108903041
Bacterial toxins [BR:
lcf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108903041
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Enzymes
108903041
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Enzymes
108903041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
108903041
NCBI-ProteinID:
XP_018560640
UniProt:
A0A4W6BQQ6
LinkDB
All DBs
Position
LG10:complement(911154..925715)
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AA seq
515 aa
AA seq
DB search
MPVVPVGGTSSSHHVVPVALTCSWLFLLFHAAFGQKPAKLPLINRKPFIAAWNAPLDMCT
HKYNVTINLNRLFQIHGSPRADWTGQNVTIFYANRLGYYPHYTPQGTAVHGGLPQNCSLD
LHLFKAYQDINHFIPAEDFRGLAVIDWEFWRPQWSRNWHKKDIYRQKSRELATKAYVNVT
AAQVEELARRRFEKSAKEFMQRTIQLGTRLRPNGLWGFYLYPDCHNYNLHDQNYTGFCPL
LERLRNDELLWLWNSSTALFPSVAIRKSHINSISNLHFTQHRIRESLRVASLTSKEYDLP
TYVYLRLGYRDEALAFLTAKDLIHTIGESAALGAAGFVIWGDMNLTSSRHNCTKVKSFLS
HRLGQYITNVTRAAEVCSDLLCQGNGRCVRRNPRARHYLHLSSKSYRIWPLGNGEFTVAG
WHSPDDLQLLTERFRCHCYEGHEGESCDSINKVREDDELWRGEGQDEQEKKRTQWEVEQK
DPDREGKSAGPSTSVSLHMMLLMLLLNLSIVKTVV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggtgccagtgggcgggacatcctcctcccaccatgtcgtacctgttgccctc
acctgttcctggctgtttctgctcttccatgctgcctttggtcagaaacctgctaagctg
cccttgatcaacaggaagcccttcattgcagcctggaacgccccgttggacatgtgcacc
cacaagtataacgtcaccataaacctcaaccgtctcttccaaatccacgggagcccacgt
gctgattggacgggccagaatgtcaccatcttctacgccaaccggctgggctactaccct
cactacaccccgcagggtactgccgttcacggcggcctaccacagaactgcagcctggac
ctgcacctgttcaaggcctaccaggacatcaaccacttcatccctgcagaggacttccgc
ggccttgccgtcatcgactgggagttctggcggcctcagtggagccgtaactggcacaag
aaggacatctaccggcaaaagtcaagggaactggccacaaaggcatacgtgaacgtgacg
gcggcgcaggtggaggagctggcacgccggcggtttgagaaaagtgccaaggagttcatg
cagaggactattcagctggggacacgccttcgccccaacggcctctggggtttctacctc
taccctgactgccacaactacaacctgcatgatcagaactacacgggcttctgccccctg
ctggagaggctgaggaacgacgagctgctgtggctgtggaacagcagcacagcgctcttc
ccctcagtggcaatcaggaaaagtcacatcaacagtatcagcaacctgcacttcacccag
cacaggatcagagagtcgcttcgtgttgcctcgctgacctctaaggagtacgacctccca
acctacgtgtacctaaggctgggataccgagacgaggccctggccttcctcaccgcaaaa
gacttgatccacacaattggagagagcgctgctctgggagctgcaggatttgtcatctgg
ggcgacatgaacttgacctcatccaggcataactgcaccaaggtgaagtccttcctgagc
caccgtctgggtcaatatatcaccaacgtgacacgagctgccgaggtctgcagcgacctc
ctgtgccaggggaatggccgctgcgtccgccggaacccccgtgcccgccattacctccac
ctgagctccaagagctaccgcatttggcccttaggtaacggggaattcactgtggccggg
tggcactctccagacgacctgcagctgctgaccgagaggtttcgctgccactgttatgaa
ggccacgagggcgaaagctgcgacagcatcaacaaagtaagagaggacgacgaactgtgg
aggggggaggggcaggatgagcaggagaagaagaggacccaatgggaagtcgagcagaaa
gacccagacagggaagggaagagtgcaggaccttcaaccagcgtcagccttcatatgatg
ttactgatgctcctcttgaacttatcgatagtaaagacagtcgtatga
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