Lates calcarifer (barramundi perch): 108903052
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Entry
108903052 CDS
T04895
Name
(RefSeq) hyaluronidase-5
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00076
Dermatan sulfate degradation
lcf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108903052
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108903052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcf02042
]
108903052
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108903052
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108903052
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108903052
Bacterial toxins [BR:
lcf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108903052
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Enzymes
108903052
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Enzymes
108903052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
TC1
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108903052
NCBI-ProteinID:
XP_018560649
UniProt:
A0A4W6BMZ8
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All DBs
Position
LG10:complement(895164..904741)
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AA seq
477 aa
AA seq
DB search
MNKVKHFSIFITMLALLSYCQTLPRTDPPIHPHYPFLFMWNAPTELCDIRFGLPLDLSHF
HIVSSTLKTATNQSISIFYTDRFGIFPYVDEDTGEMYDEGLPQLIDLKEHRELAEDDIEY
YIPANQPGLAVLDFEEWRPQWIRNWGSKDIYRQISIETVKKKNASLSDDEAEDRAKIVFE
RAAKRYFLRSIGLGKKLRPNRLWGYYLYPDCYNYDYNQDMTRFTGECPAIEKDRNNDLLW
LWNVSTALFPSIYLEEVLKDSQQARLFVRHRIQEAMRVSTLPNNSYSIPVYAYIRPVYKD
SINDYMSEFDLVNTIGEAAALGAAGIISWGDMNVTESEDSCFDARRHLEQVMNQYILNVS
TATQLCSEALCQGRGRCVRKHWDDDVYLHLDPRRYQIQQQRTGSPLTVSGDLSQDDINWF
DRSFDCMCYSEEPCRSVLTINIIQEAVVTRKNGGADRPRPFLLVMVLLCLKLVGMGI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtcaaacatttctccatcttcatcaccatgttagccctgctgagctactgc
cagaccttaccaaggacggatcctcccatccatcctcattaccccttcctgttcatgtgg
aacgccccgactgagctgtgcgacatccgcttcggcctgcccctcgacctctcccacttc
cacattgtcagcagcaccctgaaaacagcgacgaaccaaagcatctccatcttctacact
gaccgctttggcatcttcccctatgtggacgaggacactggtgagatgtacgatgagggt
ctgccacagctgatagacctgaaggagcaccgcgagctggccgaggacgacatcgagtac
tatattcctgccaaccagccaggccttgctgtgcttgactttgaggagtggaggccgcag
tggattagaaactggggcagtaaagacatctaccgacagatttctatcgaaacagtcaag
aagaaaaacgcatcactctctgatgatgaggcagaagaccgggcaaagattgtctttgaa
cgtgcagccaagaggtacttcctccggtctattggccttggcaagaagctgaggcccaac
agactctggggttactacctgtatcccgactgctacaactacgactacaaccaggacatg
acgcgcttcaccggagagtgtcccgccatcgagaaggacagaaacaatgacctgttgtgg
ctctggaacgtgtccacagcgctctttccatccatctatctggaggaggtgctcaaagac
tcccagcaggcccggctgttcgtccgccatcgaatccaagaggccatgagggtgtcgacg
ctccccaacaactcctactccatcccggtctacgcctacatccgccccgtgtacaaggac
agcatcaacgactacatgtcagagtttgatctggtcaacaccatcggagaagctgcagct
cttggcgccgccggcatcatttcctggggagacatgaatgtcacagagtcagaggactct
tgctttgacgctcgacgccacctggagcaggtcatgaaccagtacatcctgaatgtctcc
acggcaacgcagctctgcagcgaagctctctgccagggccgaggtcgctgtgtgaggaag
cactgggacgacgacgtctacctccacctggacccacgtcggtaccagatccagcagcag
cgcaccggcagcccgctcactgtgagcggcgacctctcgcaggatgacatcaactggttc
gaccgcagctttgactgcatgtgctacagcgaagagccatgcagatcggtcctgacgatc
aacatcatccaggaggccgtcgtcaccaggaagaatggaggtgctgacaggccccgcccc
ttcctgctggtgatggtactgctctgtctgaagcttgtcgggatgggaatataa
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