Lates calcarifer (barramundi perch): 108903089
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Entry
108903089 CDS
T04895
Symbol
si:dkey-185m8.2
Name
(RefSeq) trichohyalin
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108903089
NCBI-ProteinID:
XP_018560702
UniProt:
A0A4W6D7L1
A0AAJ7QNC8
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Position
LG14:6968934..6981238
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AA seq
2176 aa
AA seq
DB search
MKDLYLLHCRVDTPQMKLEKLLSAGVSLLLPLPAEILPVRLTGTKKRKRKDKRKAVTSEV
MDTTDESLSLITVPNGAYPVLLGRKGAGKSAAGNTILGGVGGFESGKPTEECVKRRADVE
GRKVTVVDTPGWEWYYPLNSTPNWVRRETLRSVSLCPPGPHAVLLVVRSCASVTDAYIME
IEEHLEPLGKGVWGHTMLLFTRGDELGLTTMEQRILTSGPALQRLLQKCGNRYHVVNNRS
KGDGTQVKELIRKLEQMVEGKKDGHSHLEMDSTVVLGLEADGKRRARERRKKQRQMEAQM
QRGTIKAALTSDGPQGSELDAHQSFSKAPRRLPEVRLVLLGERETGKSSAGNTILGKTGF
FQAGAVTEECIRHQAEVAMRLVTVVDTPGWEAGVAGATTERVKREIVSSVALCPPGPHAL
LVTLRVDTLVRAGHVREHLELLGEGVWRHTILLFTHGDQLREGVDIEQHIQGGGRDLQWL
LEKCRRRYHVISSVDGGGRGGSAKVTELLEKVEKMATMNRCEAFSSLVQEVRDLSQQRNE
KFNQRLKEIGDKMLRQEVELKNMREREMKSIRWFFDRKKKVKSPGKADIQREEEEDEDRR
IGDRKNDIGELEERMRWLTEDKEREVQDLSLENERIGVALKQSNQERDNAMLSLELKERE
IEELKERIDEQQLKLLDLERAGVENEHERKQREDAIRAKTQEWRNEVEKLEETVELHKKE
KAEWMEKADSLKAEMDKTKRHYNDVLERKEQENNREMTKLEEKLKKEMEIKMSEKDKEQD
ELRKKASEEKQITLDNAKQYEKDMERKVEEMKAQHKAEIEKKMQEREKAIQDIKLQHQEE
MARKIGEIEKMMKTTRFRHQEEIDQNLKERAHDMERVKQQHENEIRDMQQEKQREITDLK
KQFAKENEEHLQAKKKEIAELEQKYQAEIKDKMQENEKDKEMIDLNHKKDMAQKMQEKEK
ETEALKLQHQEELTRKINDMEKLMEARKAEHQKEIDRKVKENKEDVERLQQQYMKKVKNI
EEERERETVELKEQFAKETEKQLQERQREIRELEQKYAAKIEENVLQHEKEKEMINQANE
KHILEKLQERDRLTEELKRQHVNEVEGKKQESQKEKERYEKEMEKRMEEKEKEVEGMKLN
VKELKEKLQQKEEKERDHLNYCNELEQRLDEKQKEIEEMKLNVKEMKEKLQQKEETEINH
LNNKKEMEQRLEEKEREIEETKEQLKQLEQTLRQTEEERETDRLNHKRQIEQKLGENERV
IEKLNQHIKDIEEILQRKEEERGEIILNQKKEAEQRLRDKEREMDEMKLQLLNEMERKVK
EKEAEIEGIKQQADSRETRWREEQKRKDEKGENEMNKLIKIIDEKNKELTQAQCLLAQRD
TEVNEAKTTCASYLKEIEDLKESNENQTSSIIEIQQRHTEQERKKDAEMMEKLQEKEEEL
EHLRQKDRENEKEIVQMKLTIEQTKSELKNLTNKMEKEMTSMIQEYEKEIARRNENIESI
TKEKDDAITCLEEGRQRISDVTEKYEESQKRAEELQEQNEKMRKEMDNLKIKYEELTESE
EEVRRHVRGYEEQVKSKESEIQSILEERDLEIRALKEANDELEVEIERMKEREDDTKMEM
NELRENFERQLMEKQNEFRTKGEEFLKREQEVGEREQNQSRNEEELSKRGLQLDAKEVEL
VEREAKLESKEQELRGLEVNLEIRQKQREEIDQYEQDVKMKAQSIEIKEREIDSLLRLLE
GTQKELSSHGQDLQKKVRGLKDQGKELKDREHYLKNEEQELLNWKSELQMRNEHVHSTTQ
QLDEMGRDLAFLKDELHKKEKHLKMSLQKLNKWEQNLAAREAELRKREQRHLGNGQHEAE
DNMRVHEESFFSQEAEVESSEDDVHVMYQEVSERRGNRGGREADKGESTKDREDQRMKTA
LSAAESNNCHLETLKEIEMADKKEGMRGRGAESRKKRGREDLERQRVSRDLRLFSQSQGH
RSSNNTNSAGGSDLRVVVLGESWSPCSPAGITILGGEASELDGSTFRSWRGQIAGRHFAV
VEPLGLRWRDGPDPTKTSQSLLDSISWCHPGPHIVLLLMPAFLTCTQKYRRAVEEHMGLF
GEEIWQHTLVLFTWGETLGVSAEQHILRNGELMGLIERCGGRYHVLTSKKTNCVTEGLFE
KMENIVALNSREQCLV
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgtatctgctgcactgcagagtggacacacctcagatgaagctggagaag
ctgctgtcggctggagtcagtctgctgctgccgctgcctgcagaaattcttcctgtaaga
ctcacaggaaccaaaaagaggaagaggaaggacaagaggaaggcagtgaccagtgaagtg
atggacacgacagatgagagcctcagtctaatcaccgtgccgaatggtgcttatccggtc
ctcctgggccggaaaggagcagggaagagtgcggcaggcaacaccatcctgggaggagtg
ggagggttcgagagtgggaagcccacagaggagtgtgtgaaaaggcgagctgatgtagaa
gggagaaaagtaacggtggtggacacacctgggtgggagtggtactacccgctcaacagc
acccccaactgggtgaggagagaaactttacggagtgtctcgctttgccctcctggaccc
cacgctgtgcttctggtggttcggtcctgtgcctctgtgactgatgcctatatcatggag
atagaggagcacctggagccgctgggaaaaggagtctgggggcataccatgctgctgttc
accaggggagatgaactgggcctgacaaccatggagcaacgaattctgacaagcggccca
gctcttcagagactcctccagaagtgtgggaacagataccacgtcgtgaacaatcggagt
aaaggagacgggacacaggttaaagagctgataaggaagctggagcaaatggtggagggg
aagaaagatggccacagtcatttggagatggatagtactgttgtgttgggtttggaagca
gacgggaagaggagagccagggagaggaggaagaaacagaggcagatggaggcacagatg
cagagagggaccatcaaagctgctcttaccagtgatggtcctcagggttccgagctagat
gctcatcagtctttctccaaggctcctcgacgtctacctgaggttaggctggttctcttg
ggcgagcgcgaaactgggaagagttctgctgggaatactatcctcggcaaaacaggcttc
ttccaagcgggtgcagtgacagaggagtgcatccgtcatcaagcggaggtggccatgcgg
ctggtgacggtggtggacacaccgggctgggaggcaggtgtggcaggtgctacaacggag
agagtgaagagggaaattgttagtagtgtggccttgtgtccaccagggccccacgcactc
ctggtgactctgagggtggacacactggtgagggcaggacatgtgagggaacatctggag
cttttgggcgagggtgtatggagacacacaatcttgctgttcacccacggtgatcagctt
cgagagggggtggatattgagcagcacatccagggtgggggcagggacctgcagtggctg
ctggagaaatgcaggcgcaggtaccatgtcatcagcagtgtagatggaggaggaagagga
ggctccgctaaggtgacagagctcctggagaaagtggaaaagatggcgacaatgaacagg
tgtgaggctttctcctctttggttcaagaggtcagggatctgagccagcagaggaatgaa
aagttcaaccagcgcctgaaggagataggagacaagatgcttcgtcaggaggtggagttg
aagaatatgagagagcgggagatgaaaagcattagatggttctttgataggaagaagaag
gtgaaatcacctgggaaagctgacattcaaagggaagaggaggaggatgaagacaggagg
attggcgataggaagaatgatattggtgagctagaagagaggatgcgatggctgacagag
gacaaagaaagagaagttcaggatcttagccttgaaaatgagagaatcggtgtggcactg
aaacagagtaatcaagagagggacaatgcaatgcttagcctggagctaaaagaaagggag
attgaggagctgaaagaaagaattgacgagcagcaactgaagctgcttgaccttgaacgt
gctggtgtagaaaacgaacatgagagaaaacagagggaggatgccattagagcaaagacg
caagagtggaggaacgaagtggagaaattggaagaaactgtagagctgcacaaaaaagag
aaagcagagtggatggaaaaagcagattctttaaaagcagaaatggataagacaaaaaga
cactataatgatgttcttgagagaaaagaacaagaaaataacagggagatgacaaagctg
gaagaaaaactgaaaaaagagatggaaataaaaatgtccgagaaagacaaagagcaggac
gaactaagaaagaaagcctcagaggaaaagcagataactcttgataatgcaaaacaatat
gaaaaagatatggaaagaaaagttgaagaaatgaaagcacaacataaggcagaaatagag
aagaaaatgcaagagagagaaaaagcaattcaagacataaaactacagcatcaggaggag
atggccagaaaaattggtgaaattgaaaaaatgatgaagacaaccagatttcgacaccag
gaagaaattgaccagaatttgaaagaaagagcacatgatatggaaagggtcaaacaacag
catgaaaatgaaataagggacatgcagcaagaaaagcagagagagattacagatttgaaa
aagcagtttgcaaaagaaaatgaggaacacctacaagcaaaaaagaaagagattgcagag
ctggaacaaaagtaccaagccgaaataaaagacaaaatgcaagaaaatgaaaaagacaag
gagatgattgatctaaatcacaaaaaagacatggcacaaaagatgcaagagaaagaaaag
gaaacagaagccttaaaactgcagcatcaggaagaactgaccagaaaaatcaatgacatg
gagaaactaatggaggcaaggaaggctgaacatcagaaagaaatagacagaaaagtgaaa
gaaaacaaagaagatgtagaaaggctgcaacaacagtacatgaaaaaagtaaagaacata
gaggaggaaagagagagagagactgtggagctgaaagaacaatttgcaaaagaaactgag
aaacaattgcaggaaagacaaagagagataagagagttagaacaaaagtatgcagccaaa
atagaagaaaatgtgctacaacatgaaaaagagaaagaaatgattaatcaagctaatgaa
aaacacattttggaaaaactgcaagaaagagacaggctaacagaagagttaaaacgtcag
catgttaatgaagttgagggaaaaaagcaagaaagtcagaaggaaaaagaaagatacgag
aaagagatggagaaaaggatggaggaaaaggagaaggaggttgaggggatgaaactcaat
gtcaaagaacttaaggaaaagctgcaacaaaaagaagagaaagaaagagatcatctaaac
tactgcaacgaactggagcaaagactggacgaaaaacaaaaagaaattgaggagatgaag
ctaaatgtcaaagaaatgaaggagaaactgcaacaaaaggaagagacagaaataaatcat
ttaaataacaagaaagagatggagcaaagactggaagaaaaagaaagagaaatagaagag
acaaaagaacagttaaaacaacttgagcaaaccctgcgacagacagaggaggaaagagaa
acagatcgattaaatcacaagagacagattgagcaaaaactgggagaaaacgaacgagtg
atagaaaagttgaaccagcatataaaggatattgaagaaatcctgcaaagaaaagaagag
gagagaggtgagataattctaaaccaaaagaaagaggcagagcaacgactgcgagacaaa
gagagagagatggatgagatgaaattacagcttttaaatgaaatggagagaaaagtaaaa
gaaaaggaagcggagattgagggtattaaacagcaggctgactccagggagacgagatgg
agagaagagcagaagagaaaggatgagaaaggagaaaatgagatgaacaagctgataaaa
atcatcgatgagaaaaataaagaactaacacaagcacagtgtcttcttgcacagagagac
actgaagtgaatgaagcgaaaacgacatgcgcaagctacttaaaagaaattgaagacctg
aaagaaagcaatgaaaaccagacctccagtatcatcgagatacagcagcgtcacacagag
caggagaggaaaaaagatgctgaaatgatggaaaaactgcaggagaaagaagaggagctc
gagcacctgaggcaaaaagacagagagaacgagaaagagatcgtccaaatgaagctaaca
attgagcaaactaagtcagagctgaagaatctcaccaataagatggaaaaggagatgacg
agcatgattcaggaatatgaaaaggagattgctagaagaaacgagaacatagaatcgatt
acaaaggagaaggatgatgctataacttgtttggaggaaggtcgacaaaggatttcagac
gtcaccgaaaaatacgaggaaagtcaaaagagagcagaggagctgcaggagcaaaatgag
aagatgaggaaggagatggacaatcttaaaataaagtatgaggagctgacggagagtgaa
gaagaagttagaagacatgtcaggggatatgaggagcaggtgaagagcaaagaatctgaa
atccaaagcattcttgaggagagagatctggagatcagagcattaaaagaggcaaatgat
gaactggaagtggagatagaaaggatgaaagagagagaagatgacacaaaaatggagatg
aatgagctgagagagaattttgagagacagctgatggagaaacagaatgagttcagaact
aaaggtgaggaattcttgaaaagggaacaagaagtaggggaaagggaacagaaccagagt
agaaatgaagaagagttgagcaaacgaggacttcaattggatgcaaaagaggtagagctt
gttgaaagggaggcgaaacttgaaagtaaggaacaagaacttagaggactagaagtgaat
ctagagataaggcaaaaacagcgagaggagatagatcagtatgagcaagatgtgaaaatg
aaagcacagagtattgagataaaggagagggagatagacagtttgttaagacttctggag
ggtacacagaaagagctaagctctcacggccaggatcttcagaagaaggtaagagggttg
aaagaccaggggaaagagctaaaagacagggagcattacttaaaaaatgaagagcaggag
ttgctcaattggaagtcagagctgcagatgcgaaatgagcatgtacactctacaactcag
cagttagatgagatggggagagacttggcttttctgaaagacgagcttcacaaaaaagag
aaacatttaaaaatgtcacttcaaaaattgaacaaatgggagcagaatcttgcagcacga
gaggcagagttgcgtaaaagagagcaaagacatttagggaatgggcagcatgaggctgag
gacaacatgagagttcacgaggagagtttcttcagtcaggaagctgaggttgagagctca
gaagatgacgtccatgtaatgtaccaagaggtcagtgagagaaggggaaacagaggagga
agagaggcagataaaggagaaagcacaaaggatagggaggatcagaggatgaaaacagca
ctgtcagctgcagagagcaataactgtcatcttgaaacactgaaagagatagagatggct
gataaaaaggaagggatgagaggaagaggagcagagtcgaggaagaaaagaggcagagag
gacctggaaaggcagagggtcagcagggatttgaggttgttttctcagagtcagggtcac
agaagttcaaacaacacaaactcagctggagggtcagatttgagagtggtggtgttagga
gagtcctggtcgccctgctccccagccggaatcaccatccttggtggagaagcgtccgaa
ctcgatggctctaccttcaggtcttggagaggtcagatcgctgggagacacttcgctgtt
gtagagccgctgggtttgaggtggcgagacggtccagacccaacaaaaacatcacagagt
cttctggacagcatctcctggtgtcacccaggacctcacatcgtcctcctgctcatgcct
gccttcttaacctgcacacaaaagtacaggagagctgtggaggagcacatgggtttgttt
ggggaggagatttggcagcacaccctggtgctgttcacatggggggaaactttaggggtg
agcgcagagcagcacatcctgaggaacggggaactgatggggctcatagagagatgtggg
ggcaggtatcatgtgctgacaagcaagaaaaccaactgtgtgactgaaggattgtttgaa
aagatggagaatatagtggctttgaacagcagagaacagtgtttggtgtag
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integrated database retrieval system