Lates calcarifer (barramundi perch): 108903128
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Entry
108903128 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute-4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108903128
03036 Chromosome and associated proteins [BR:
lcf03036
]
108903128
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108903128
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108903128
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108903128
microRNA pathway
RISC loading complex
108903128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
108903128
NCBI-ProteinID:
XP_018560725
UniProt:
A0AAJ7QNY0
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All DBs
Position
LG3:complement(17185907..17207865)
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AA seq
927 aa
AA seq
DB search
MRSYKSSEAAAIAQVSQSSQQSSAHLSIFPFLKLATLSFAIPPPISASVRSRQAGTETER
EASAMEALGPGPPAPTSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPE
KRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGK
DQTFKVSLQWVSVVSLQMLLEALSGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSP
PEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNIN
EQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAM
ECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM
IKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPMLQYGG
RNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFKHLKMSYVGLQLIVVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPP
AGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDMSQEQLFSQEVIQDLTNMVRELLIQ
FYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHH
TRLFCSDKAERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSG
QSNGRDPQALAKAVQIHYDTQHTMYFA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagttacaaatcgtcagaggcagcagcgatagctcaggtcagtcagtccagtcag
cagtcatccgcgcatctatctatattcccttttcttaaattagccactttaagcttcgcg
ataccgcccccaatttcagcgtcggtacggagccggcaggccgggacagagacggagaga
gaggcctcggccatggaagcgctcggacccggcccgcccgcccctacctctctgtttcag
cctccgcggcgtcccggcctcggcacggtggggaaacccatccggctccttgccaaccac
tttcaggtgcagattcccaagattgatgtctatcactatgatatcgacatcaagcctgag
aaacggcctcgaagggtcaacagggaggtggtggacaccatggtgcggcacttcaagatg
cagatctttggagaccgacagcctggctacgacgggaagaggaacatgtacacagcacat
ccactgccaatagggagagacagggtggatctggaggtgaccctgcctggcgaggggaag
gatcagacgttcaaggtgtccttgcagtgggtgtccgtagtcagtcttcagatgctgctg
gaagccctgtcaggccaccttaacgaggtccctgaagactctgttcaggctctggatgtc
atcacacggcatctgccttccatgaggtacactccagtggggcgttcgttcttctcccct
ccggagggctactaccatcctcttggtggaggcagggaggtgtggtttggtttccatcag
tctgtccgtcctgccatgtggaacatgatgctcaacattgatgtgtcagccactgctttc
taccgtgcgcagcctgtgatagagttcatgtgcgaggtgctcgatatacaaaacatcaat
gaacagaccaaaccactgacagactcgcagcgcgtcaagttcaccaaggagataagaggc
ttgaaagttgaggtcacacactgtggtcagatgaagaggaagtatcgtgtgtgcaatgtc
acgcgccgacctgccagccaccagacgttccccttacagctcgagaacggccaagccatg
gagtgcacagtagctcagtatttcaagcagaagtacaatctgcagctcaagtatccacat
ctaccctgtctgcaagtagggcaggaacagaagcacacctatcttcccctggaggtctgt
aacatcgtagcaggccagcgctgtatcaagaaactgacagacaaccagacgtccaccatg
attaaagctacggctcgctcagcccccgacagacaggaagagatcagcagattggtcaaa
agcaacagcatggtcgggggcccagacccttacctgaaggaatttggcattgtggtacac
aatgacatgacagaggtgacagggcgtgttctcccagcgcccatgctgcagtatgggggc
cggaataaaaccgtggccacacccaaccagggcgtgtgggacatgagggggaaacagttc
tacgccggcatcgaaatcaaggtctgggctgtggcctgcttcgctccacagaaacagtgt
cgggaagacctgctcaagagtttcactgaccagctgcgaaagatctcaaaggatgctggg
atgcccattcaaggccagccatgtttctgtaaatacgcccaaggagctgacagcgtggag
cccatgttcaaacacctcaaaatgtcttatgtaggtctgcagctgattgtggtcattctg
cctggaaaaacacccgtatatgctgaggtaaagcgggtgggagacaccctcctcggcatg
gccacccagtgtgtccaggtgaagaacgtggtgaagacgtcccctcagaccctctccaac
ctctgcctcaagatcaacgccaagctgggcggcatcaacaacgtcctggtgcctcatcag
aggccctctgtgttccagcagccggtcatcttcttaggtgctgatgtgacacatccacca
gcaggtgatgggaagaagccgtccattgcggctgtggtgggcagcatggacggccacccc
agcagatactgcgcgacagtgcgagtccagacgtccagacaagatatgtcccaggagcag
cttttcagtcaggaggtaatccaagatctgaccaacatggtgcgggagctactcatccag
ttctacaagtccacacgcttcaagccaacacgcatcatctattaccgtggtggcgtgtct
gagggacagatgaaacaggtggcgtggccggagctgatcgccatccgcaaagcatgcatc
agcctggaggaggattataggccgggcattacctacattgtggtccagaagcgtcaccac
actcgtctcttctgctctgacaaagctgagagggttgggaagagtggtaatgtcccagct
ggcaccacagtggacagtaccatcacacacccgtccgagttcgacttctacctgtgcagc
catgctgggattcagggaaccagccgtccctcccactaccacgtcctgtgggatgacaac
tgtttcacagctgatgaactgcagctcctcacctaccagctgtgccacacctacgtccgc
tgcactcgctctgtctccatcccagcaccagcctactacgccaggctggtggctttccgt
gcccgctaccacctggtggacaaagaccatgacagtgctgaaggcagccacgtttcaggc
cagagtaacggccgggacccccaggctttggccaaggctgttcagatccactatgatacc
cagcacaccatgtacttcgcctga
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