Lates calcarifer (barramundi perch): 127139101
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Entry
127139101 CDS
T04895
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
127139101
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127139101
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
127139101
NCBI-ProteinID:
XP_050921719
UniProt:
A0AAJ8DK32
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Position
LG7_2:complement(510270..517405)
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AA seq
1133 aa
AA seq
DB search
MSDEDREEGVPPSKTTLCGEHESQTKAQSPEQQHSPHSAGPGPGPGPGPGSEPEPSCVSM
KRDRSASPSLLSDFRQSVDGRIQQQRPDSPGPSCLSLKSNESKKGFINFKGGRPSADQIV
DQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVKKELKKMQKVLSPDYPECLESQRED
EEVLDGEDEEQRRSSREEFLKITVNFLRRMKQEELADCLQSKSPAMCQHNLKSNLKKKFQ
CLFEGISKAGNPTFLNQIYTELYITEGGTGEVSDEHEVRQMETTSRKPDRPETTIRQEDI
FKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKE
KKLSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSV
DVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDE
DQASRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTQMYIHFLVVQ
TKLKNIKYDGGSGTDPHWSPETRKMIKSLGKLAFDQLQKGNLIFYESDLTECGIDIRAAS
VYSGVFTQIFIEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLSEEQPTSQKS
KRRKYESAETQFYQRAVDKALQSPNGHLDLFLRFLLGLSLETNQSLLQGLLTQTGSGSET
NQETVQYIKKKVEETPSAEKSINLFHCLNELNDRSLVEEIQQSLSSGRLSTDKLSPAQWS
ALGFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVL
SSQSSSLRGLDLSDNDLKDSGLKTLSVGLKSPHCSLKTLSLSGCLITEEGCASLVSALSS
NPSHLRELDLSYNHPGDSGVKLLSAGLEDPDWRLDTLRVEPGGVRWLRPGLRKYSCQLTI
DTNTVNTKIKLSDNNRKVIYVEEDQSYPDHPDRFDFWPQLLCRTGLTGRCYWEVEWKGEV
YVTLSYRGIRRKGDREYHKFGRNDQSWSLFCSDVYGYSVSHNNTEKYVTSSSSSSVSNRV
AVYVDCPAGSLSFCRVSSDSLLHLHTFNTTFTEPLYPGFGFWRSGSSLSLCSV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaggacagagaggagggagtccctccctctaaaaccactctgtgtggggaa
catgagagccagaccaaagctcagagcccagagcagcagcactcaccacactctgctgga
cctggacctggacctggacctggacctggatctgaacctgaacccagctgtgtgtccatg
aagagagaccgatcagcatctccttctcttctttcagatttcagacaatctgttgatgga
aggatccagcagcagagaccagactctcctggacccagctgtctgtctttaaagagcaac
gagtcaaagaaaggcttcattaactttaaaggtggacgtccatcagctgatcagatagtg
gaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaacacacctg
gactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaaggagctgaag
aagatgcagaaggttctgagtccagattacccagaatgcttagagagtcagagggaggat
gaggaggtgttggacggtgaggatgaagagcagaggaggagcagcagagaggagtttctg
aagatcacagtgaacttcctgaggagaatgaagcaggaggagctggctgactgtctgcag
agcaaatctcctgctatgtgccagcacaacctcaaatctaacctgaagaagaagttccag
tgtttgtttgaggggatctctaaagcaggaaacccaacctttctgaatcagatctacaca
gagctctacatcacagagggagggactggagaggtcagtgatgaacatgaggtcagacag
atggaaacaacatccaggaaaccagacagaccagaaacaaccatcagacaagaagacatc
tttaaagcctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggct
ggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagcc
aaccaggacatacacttcacatttccattcactttcagagagctgaatgtgctgaaagag
aaaaagttgagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcagga
atctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttccacaacactgagatcctgactgatgttacagagtccacctcagtg
gacgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagag
gtcagagggttcactgacccacagaaggaggagtacttcaggaagaggttcagagatgag
gatcaggccagcaggatcatctcccacatcaagacctcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaaccaga
gagggaggagagctgcccaagaccctgactcagatgtacatccacttcctggtggttcag
accaaactgaagaacatcaagtatgatggaggatctgggacagatccacactggagtcca
gagaccaggaagatgattaagtctctgggaaaactggcttttgatcagctgcagaaagga
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacagatctttatagaggagagaggactgtaccaggacaag
gtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
accttcatcaactctggagtcaatctgctgtcagaagaacaaccaacctcccagaagtct
aaaagaagaaaatatgaatctgcagagacacagttctaccagagagctgtggacaaggcc
ttacagagtccaaatggacacctggacctgttcctccgcttcctcctgggtctttcactg
gagaccaatcagagtctcctacaaggtctgctgactcagacaggaagtggttcagagacc
aatcaggaaacagtccagtacatcaagaagaaggttgaagagactccctctgcagagaaa
agcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatc
caacagtccctgagttcaggacgtctctccacagataaactgtctcctgctcaatggtca
gctctgggcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaa
tactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctctaacaaa
gctctactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctc
agctcccagtcctctagtctgagaggtctggacctgagtgacaatgacctgaaggattca
ggactgaagactctgtctgttggactgaagagtccacactgttcactgaagactctcagt
ctgtcaggctgtctgatcacagaggaaggctgtgcttctctggtctcagctctgagctcc
aacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtg
aagctgctgtctgctggactggaggatccagactggagactggacactctcagggtggag
cctggtggagtccgatggttgagaccaggtctgaggaagtattcctgtcaactcacaatc
gacacaaacacagtgaacacaaagatcaaactgtctgacaacaacaggaaggtgatatat
gtggaggaggatcagtcatatcctgatcatccagacagatttgacttctggcctcagctg
ctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggaaaggagaggtt
tatgtaacattgagttacagaggaatcagaaggaaaggggacagagaatatcataagttt
ggaaggaacgatcagtcctggagtctgttctgttctgatgtttatggttactctgtcagt
cacaataacacagaaaagtatgtcacctcctcctcctcctcctctgtctctaacagagta
gcagtgtatgtggactgtcctgctggctctctgtccttctgcagagtctcctctgactct
ctgctccacctccacaccttcaacaccacattcactgaacctctgtatcctgggtttggg
ttctggcggtctggttcctcattgtctctgtgttcagtgtag
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